Mp4g19090



Description

Annotation

Database ID Description
Pfam PF19086 Terpene synthase family 2, C-terminal metal binding
SUPERFAMILY SSF48576 Terpenoid synthases
PANTHER PTHR35201 TERPENE SYNTHASE
Coils Coil Coil
Gene3D G3DSA:1.10.600.10 Farnesyl Diphosphate Synthase
MapolyID Mapoly0825s0001 -

Nomenclature

Gene symbol Product Transcript ID Status
MpMTPSL23 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Associated Literature (AI-based literature mining, Beta-version)

Secondary metabolism enzyme, Terpene biosynthesis enzymes (from nomenclature)

0 core 1 peripheral

Jibran, R., et al. (2024b) · Frontiers in Plant Science  research experimental background
Terpene-synthase-like (Mp4g19090); DEG up in Mpd27-2/Mpccd7.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g19090.1 chr4:25626326..25628971 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g19090.2 chr4:25626326..25628971 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g19090 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g19090 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.