Mp5g00110



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
SMART SM00356 c3hfinal6
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Coils Coil Coil
Gene3D G3DSA:2.40.50.1070 -
ProSiteProfiles PS51687 SAM-dependent methyltransferase RNA m(5)U-type domain profile.
Gene3D G3DSA:4.10.1000.10 -
CDD cd00590 RRM_SF
CDD cd02440 AdoMet_MTases
PANTHER PTHR45904 TRNA (URACIL-5-)-METHYLTRANSFERASE
ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1.
SUPERFAMILY SSF90229 CCCH zinc finger
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
Pfam PF05958 tRNA (Uracil-5-)-methyltransferase
SUPERFAMILY SSF54928 RNA-binding domain, RBD
Gene3D G3DSA:3.30.70.330 -
KEGG K15332 tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
KOG KOG2187 tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes; N-term missing; [J]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
MapolyID Mapoly0078s0012 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H19 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g00110.1 chr5:248886..254881 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.