Mp5g01590
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| MapolyID | Mapoly0175s0019 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSUK1 | long non-coding RNA | Published |
Associated Literature (AI-based literature mining, Beta-version)
Gene convergently transcribed adjacent to MpKNOX1 and expressed predominantly in antheridia.
1 core 2 peripheral
Dierschke, T., et al. (2021)
· eLife research experimental subject
Gene convergently transcribed adjacent to MpKNOX1 and expressed predominantly in antheridia.
Kajiwara, T., et al. (2024)
· Plant & Cell Physiology research citation comparator
Male-specific antisense lncRNA cited as a parallel case, likely suppressing its sense counterpart KNOX1 through a non-sequence-specific transcriptional-overlap mechanism.
Pietrykowska, H., et al. (2023)
· Plant Molecular Biology review citation background
miRNA/tasiRNA target module (Pietrykowska 2023)
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g01590 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g01590.1 GAAGCTTCAC ACTCAGTTTA GCTGCTCAAG ATACCAATCG GGCGCTTGTC CAACCCAAGA GACGCAACGC TTTAACAAAA AGTCGCTTTG TCCTCCTCCA AGTTCGCATT CCAAATGTAA TCGGGATTCG ACACCGCGAA CGATGAATGG CATGAGAATC ACGTAGAGAA TATGGTTTTG ATTCCTCGGT AAGCCTGCAC TATCGATGGC GGCGGCAGGA AAAGCAGCTC CAGCTGCTGG AAAGCCTGCC GCAGTCCCAG CTGCAGGGAA GGCGACGGGC AGCGCTCCGG CGGCAGCGAA GACTGGTGCG TCGCAGGGAT CCAAATCTCC CACGGACTCG TCCAAATCCG TGACCGCAAG CTCTGGATCG GGATCGGCAG GCTCCGCGGG GGCGAAGAAA CCATCTCTGA AGGCGGGAGA CCCAGCTGCT GCTCTAGTCG TGCTGGGACC AGATGGGCTT CCAGTAGATC CAGCTTCACT GCCGCCTGTC GAAGAGGCTC CTCCTCCTCC TCCCCCGAAG CCATATCTCG GTACGCCGCC GCCTCGCTGG CTGCGGCCTC CATGGGAGAA AGCTCCACGC GATGTGGGGC CCTTGCCGCC CCGGTTCGTT CCTTACAGCC GAAGGCTGCT GGAGGTCACG AACTTGAGAC TCCCGCCGCA GATCGAATTT CAGGACGCCA TGGGCGTGCG CACCATGATC AAGCTCAAGA AGACTTACCC CCGACTCATA AGATTGCACA TTGGACGCGT CGGAGTGACG TTCGAGAAGC ATGCCGGCCC TGTGCAGATC TTTTTGGAAG TCCTCTGCCA GGATCTTCCA GAGTTTCCAG AGCTGATTAA CAAGCCCCAG TTCTCGACGT GCAATTTCTA TCCCATGAGA TAGCCGGATG CTCGATGATA TGTAACCAGC GAGTGCTCCC AATCCGAAGA CTGCGAGGGA GAATGTAGAT GGCCGCTGAC CTGCAGGTTC ATCGATTGGG GCACTTTGAT GAGATCGATG CCACGAAAGC GCCAAAACAA ATCAGTTTCG ATACCATCCC AGCTCGACGT CAGTGCCAGG GCGACCTTGA CTATACCCAG AGCTCTATAA GTAGTAATGT GGGTCAAATT TGATCGTATG GAGCTCGGAG GTTAGATCAG AAACCCATTT TGAGGCAATC GTAGAATGTG AGAAAGGAAG TATGGCAATG TACTACAGTT GCCGTCTTTC CTTCCGAGAA AATTGGTGAG CCCTGTGATC GATATCAACA GCACTGCAAA CATTTCCACC GACAACCTGT TTGAGAAAAG CATAAAGCGG TTCAATGTTT GAGGATCCTT CCAACACGGA TGCTTCCTGC CTTGATGGGA TCGGAGCATG GTACGCAAGG TCTGCAAGGA GATTCACTTA CTCAGAGTGA GCGTGGACCG CAGTTATGTG CGTTATCCAC CTAAACATAA TTTTAGATTG TGACACCAAT CAGGTACATA AATGTGTACC AAATTACACA CTTTGCTTGC GATGCAATTA AAAGTAAGGA CGTCAGTGAG AACACAACGA CTTCTAGATG TCCTTTTATT CAAATGAAGG AGATCGCTCA CAAAAATCTG AACTTCTACA AAGAAAGATC TGATCTCTAC CGAACGACTG CCGACAGCAT TTATCGGTAT GCCAGCTATG AGTTCGATCC TGGCTTTCAG AATCGTAGTC TAAGGGACAT AATATCTGCA GGATGTATCT GGGCAGACAA ACTCAGAATG AGCTACCTGG CCTCAAAGTT ATTGGACTTC TATATGACAT CATGGTTAAG ATTCCATTTG GTTCTCACAA CGTACAGCTC ACAGCTTCCA AATCTCGTCT TCTGAGAAAC GTCCATGGCA GAAATGTGAT TTGAGTCATC GAGTCCGACA TCATAGATTC TCCTGAAGGC ATGTCAATCT AGCTGCGAAC GAAAAGGGGC TGGAGATCAT CGTCTTGGGC CATTCATCTT GTAACAGTCG GCCGCATGGT TCTTGTGATT TTCAGAGAAC GCAGAGCAGC AGTGTCTTTT CCTCTGATTG ATGAACCAGT TATTGATCTG ATCAATCTCA AGGCCCGAGC ACTTGGCCAG AATTTGTTTC TCCTCCTCCT GAATTTTCAC GTAGCTGTCA TTATATGCTT TGTGACTTCA GTAAATATGC ATTAGTAAAA CGAGCAAGCA AACTTGGGGA ATTTAGTTTG GTTTTCTTCA CGATGTGAAG TAATTTGCAG CCTTGGAAGG CTTCAAATTA TACTGGCCAC ATCACAGATG AAATGATCGC AATTCGGTAA TCAGACCCAG AAGATAAGAA ATAAGCACTC AGCTGCAACC AGATAGGCAC GACTCTTGCC GAGCAGCTGG ACAGCTCAAA CAATGTGGAA AAAGCCTGGA CGTTGAAAGT GCATCGGGGA ACCAAAAGGA AATAATTACT TACCGACGGG TAAGGCTTCC CCTGATGTTC GGTCCACCAA TTGAGCAAAA TACGTCGAGC CGGATCGGGC AGCTTCAGGT TTCTGCGGCC TTCTTTCAGA TGCCTCGTTT TCAAGGTCCT GAGAAGACTT GGATTATATG CAGCTAAGAT TGCTCCTCTC CATTCTTGAT CTGTCAACAT GGGGAGGGCA GATCGCTGGG GCCTGTCTTT TGCTTTTTCA TGGTCTTGAA TTATCTTCTC CATTTCTTCA GTGAAAAGCT CACTTTGCCC ACCACTGACC GAATCACTTT CGCTCTGCTT TGAAACATCA CCTGTGTTGA TGCATCAGTT AGTGACTGTC AGTCTTCTAG AAGCTCGTCC TAGTGTCTGT TGTGCGCTTA CCACATGGAA AAGAAAGTAA GTTTCAGAGC TCATCCAACG CAGGCAGCCA GCAATCGTCT CAACCTAGTG ACCTTAGTAA GACATGATCA AGACCTACTA GCTTTTCGAA CCCAACAGCA GAAGATGATT TTACTCACTC AAATTCCCGC AAGACGACCA CATATACCAA GTAATTGACA TTCA |
mRNA UTR + CDS |
| >Mp5g01590.1 GAAGCTTCAC ACTCAGTTTA GCTGCTCAAG ATACCAATCG GGCGCTTGTC CAACCCAAGA GACGCAACGC TTTAACAAAA AGTCGCTTTG TCCTCCTCCA AGTTCGCATT CCAAATGTAA TCGGGATTCG ACACCGCGAA CGATGAATGG CATGAGAATC ACGTAGAGAA TATGGTTTTG ATTCCTCGGT AAGCCTGCAC TATCGATGGC GGCGGCAGGA AAAGCAGCTC CAGCTGCTGG AAAGCCTGCC GCAGTCCCAG CTGCAGGGAA GGCGACGGGC AGCGCTCCGG CGGCAGCGAA GACTGGTGCG TCGCAGGGAT CCAAATCTCC CACGGACTCG TCCAAATCCG TGACCGCAAG CTCTGGATCG GGATCGGCAG GCTCCGCGGG GGCGAAGAAA CCATCTCTGA AGGCGGGAGA CCCAGCTGCT GCTCTAGTCG TGCTGGGACC AGATGGGCTT CCAGTAGATC CAGCTTCACT GCCGCCTGTC GAAGAGGCTC CTCCTCCTCC TCCCCCGAAG CCATATCTCG GTACGCCGCC GCCTCGCTGG CTGCGGCCTC CATGGGAGAA AGCTCCACGC GATGTGGGGC CCTTGCCGCC CCGGTTCGTT CCTTACAGCC GAAGGCTGCT GGAGGTCACG AACTTGAGAC TCCCGCCGCA GATCGAATTT CAGGACGCCA TGGGCGTGCG CACCATGATC AAGCTCAAGA AGACTTACCC CCGACTCATA AGATTGCACA TTGGACGCGT CGGAGTGACG TTCGAGAAGC ATGCCGGCCC TGTGCAGATC TTTTTGGAAG TCCTCTGCCA GGATCTTCCA GAGTTTCCAG AGCTGATTAA CAAGCCCCAG TTCTCGACGT GCAATTTCTA TCCCATGAGA TAGCCGGATG CTCGATGATA TGTAACCAGC GAGTGCTCCC AATCCGAAGA CTGCGAGGGA GAATGTAGAT GGCCGCTGAC CTGCAGGTTC ATCGATTGGG GCACTTTGAT GAGATCGATG CCACGAAAGC GCCAAAACAA ATCAGTTTCG ATACCATCCC AGCTCGACGT CAGTGCCAGG GCGACCTTGA CTATACCCAG AGCTCTATAA GTAGTAATGT GGGTCAAATT TGATCGTATG GAGCTCGGAG GTTAGATCAG AAACCCATTT TGAGGCAATC GTAGAATGTG AGAAAGGAAG TATGGCAATG TACTACAGTT GCCGTCTTTC CTTCCGAGAA AATTGGTGAG CCCTGTGATC GATATCAACA GCACTGCAAA CATTTCCACC GACAACCTGT TTGAGAAAAG CATAAAGCGG TTCAATGTTT GAGGATCCTT CCAACACGGA TGCTTCCTGC CTTGATGGGA TCGGAGCATG GTACGCAAGG TCTGCAAGGA GATTCACTTA CTCAGAGTGA GCGTGGACCG CAGTTATGTG CGTTATCCAC CTAAACATAA TTTTAGATTG TGACACCAAT CAGGTACATA AATGTGTACC AAATTACACA CTTTGCTTGC GATGCAATTA AAAGTAAGGA CGTCAGTGAG AACACAACGA CTTCTAGATG TCCTTTTATT CAAATGAAGG AGATCGCTCA CAAAAATCTG AACTTCTACA AAGAAAGATC TGATCTCTAC CGAACGACTG CCGACAGCAT TTATCGGTAT GCCAGCTATG AGTTCGATCC TGGCTTTCAG AATCGTAGTC TAAGGGACAT AATATCTGCA GGATGTATCT GGGCAGACAA ACTCAGAATG AGCTACCTGG CCTCAAAGTT ATTGGACTTC TATATGACAT CATGGTTAAG ATTCCATTTG GTTCTCACAA CGTACAGCTC ACAGCTTCCA AATCTCGTCT TCTGAGAAAC GTCCATGGCA GAAATGTGAT TTGAGTCATC GAGTCCGACA TCATAGATTC TCCTGAAGGC ATGTCAATCT AGCTGCGAAC GAAAAGGGGC TGGAGATCAT CGTCTTGGGC CATTCATCTT GTAACAGTCG GCCGCATGGT TCTTGTGATT TTCAGAGAAC GCAGAGCAGC AGTGTCTTTT CCTCTGATTG ATGAACCAGT TATTGATCTG ATCAATCTCA AGGCCCGAGC ACTTGGCCAG AATTTGTTTC TCCTCCTCCT GAATTTTCAC GTAGCTGTCA TTATATGCTT TGTGACTTCA GTAAATATGC ATTAGTAAAA CGAGCAAGCA AACTTGGGGA ATTTAGTTTG GTTTTCTTCA CGATGTGAAG TAATTTGCAG CCTTGGAAGG CTTCAAATTA TACTGGCCAC ATCACAGATG AAATGATCGC AATTCGGTAA TCAGACCCAG AAGATAAGAA ATAAGCACTC AGCTGCAACC AGATAGGCAC GACTCTTGCC GAGCAGCTGG ACAGCTCAAA CAATGTGGAA AAAGCCTGGA CGTTGAAAGT GCATCGGGGA ACCAAAAGGA AATAATTACT TACCGACGGG TAAGGCTTCC CCTGATGTTC GGTCCACCAA TTGAGCAAAA TACGTCGAGC CGGATCGGGC AGCTTCAGGT TTCTGCGGCC TTCTTTCAGA TGCCTCGTTT TCAAGGTCCT GAGAAGACTT GGATTATATG CAGCTAAGAT TGCTCCTCTC CATTCTTGAT CTGTCAACAT GGGGAGGGCA GATCGCTGGG GCCTGTCTTT TGCTTTTTCA TGGTCTTGAA TTATCTTCTC CATTTCTTCA GTGAAAAGCT CACTTTGCCC ACCACTGACC GAATCACTTT CGCTCTGCTT TGAAACATCA CCTGTGTTGA TGCATCAGTT AGTGACTGTC AGTCTTCTAG AAGCTCGTCC TAGTGTCTGT TGTGCGCTTA CCACATGGAA AAGAAAGTAA GTTTCAGAGC TCATCCAACG CAGGCAGCCA GCAATCGTCT CAACCTAGTG ACCTTAGTAA GACATGATCA AGACCTACTA GCTTTTCGAA CCCAACAGCA GAAGATGATT TTACTCACTC AAATTCCCGC AAGACGACCA CATATACCAA GTAATTGACA TTCA |
CDS |
| >Mp5g01590.1 ATGGCGGCGG CAGGAAAAGC AGCTCCAGCT GCTGGAAAGC CTGCCGCAGT CCCAGCTGCA GGGAAGGCGA CGGGCAGCGC TCCGGCGGCA GCGAAGACTG GTGCGTCGCA GGGATCCAAA TCTCCCACGG ACTCGTCCAA ATCCGTGACC GCAAGCTCTG GATCGGGATC GGCAGGCTCC GCGGGGGCGA AGAAACCATC TCTGAAGGCG GGAGACCCAG CTGCTGCTCT AGTCGTGCTG GGACCAGATG GGCTTCCAGT AGATCCAGCT TCACTGCCGC CTGTCGAAGA GGCTCCTCCT CCTCCTCCCC CGAAGCCATA TCTCGGTACG CCGCCGCCTC GCTGGCTGCG GCCTCCATGG GAGAAAGCTC CACGCGATGT GGGGCCCTTG CCGCCCCGGT TCGTTCCTTA CAGCCGAAGG CTGCTGGAGG TCACGAACTT GAGACTCCCG CCGCAGATCG AATTTCAGGA CGCCATGGGC GTGCGCACCA TGATCAAGCT CAAGAAGACT TACCCCCGAC TCATAAGATT GCACATTGGA CGCGTCGGAG TGACGTTCGA GAAGCATGCC GGCCCTGTGC AGATCTTTTT GGAAGTCCTC TGCCAGGATC TTCCAGAGTT TCCAGAGCTG ATTAACAAGC CCCAGTTCTC GACGTGCAAT TTCTATCCCA TGAGATAG |
Protein |
| >Mp5g01590.1 MAAAGKAAPA AGKPAAVPAA GKATGSAPAA AKTGASQGSK SPTDSSKSVT ASSGSGSAGS AGAKKPSLKA GDPAAALVVL GPDGLPVDPA SLPPVEEAPP PPPPKPYLGT PPPRWLRPPW EKAPRDVGPL PPRFVPYSRR LLEVTNLRLP PQIEFQDAMG VRTMIKLKKT YPRLIRLHIG RVGVTFEKHA GPVQIFLEVL CQDLPEFPEL INKPQFSTCN FYPMR |