Mp5g02420



Description

Annotation

Database ID Description
Gene3D G3DSA:2.60.120.650 Cupin
Pfam PF08007 JmjC domain
Gene3D G3DSA:1.25.10.10 -
PANTHER PTHR13096 MINA53 MYC INDUCED NUCLEAR ANTIGEN
SUPERFAMILY SSF51197 Clavaminate synthase-like
SUPERFAMILY SSF48371 ARM repeat
ProSiteProfiles PS51184 JmjC domain profile.
KOG KOG3706 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
KOG KOG4224 Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting; N-term missing; C-term missing; [U]
MapolyID Mapoly0147s0035 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCupin77 Cupin Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g02420.1 chr5:3974122..3980096 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g02420.2 chr5:3974122..3980096 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.