Mp5g07670



Description

Annotation

Database ID Description
KEGG K08516 synaptobrevin homolog YKT6
KOG KOG0861 SNARE protein YKT6, synaptobrevin/VAMP syperfamily; [U]
PRINTS PR00219 Synaptobrevin signature
Pfam PF00957 Synaptobrevin
ProSiteProfiles PS50859 Longin domain profile.
CDD cd15867 R-SNARE_YKT6
SUPERFAMILY SSF64356 SNARE-like
SMART SM01270 Longin_2
SUPERFAMILY SSF58038 SNARE fusion complex
PANTHER PTHR45806 SYNAPTOBREVIN HOMOLOG YKT6
Gene3D G3DSA:1.20.5.110 -
Gene3D G3DSA:3.30.450.50 -
Pfam PF13774 Regulated-SNARE-like domain
ProSiteProfiles PS50892 v-SNARE coiled-coil homology domain profile.
CDD cd14824 Longin
MapolyID Mapoly0127s0017 -

Nomenclature

Gene symbol Product Transcript ID Status
MpYKT6 Ortholog of Arabidopsis YKT6 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g07670.1 chr5:8296844..8300362 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.