Mp5g10600
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF52833 | Thioredoxin-like |
| CDD | cd03419 | GRX_GRXh_1_2_like |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin |
| Pfam | PF00462 | Glutaredoxin |
| PANTHER | PTHR10168 | GLUTAREDOXIN |
| NCBIfam | TIGR02189 | glutaredoxin-like family |
| ProSiteProfiles | PS51354 | Glutaredoxin domain profile. |
| KEGG | K03676 | glutaredoxin 3 |
| KOG | KOG1752 | Glutaredoxin and related proteins; [O] |
| MapolyID | Mapoly0048s0012 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpROXY1 | CC-type GRX | Published |
CC-type GRX
Associated Literature (AI-based literature mining, Beta-version)
Functionally studied ROXY glutaredoxin: complemented Arabidopsis roxy1-2 flower defect, interacted with MpTGA/PAN by Y2H, BiFC and FRET-FLIM (C-terminal deletion MpROXY1Δ14 abolished binding), and gave redox-dependent supershift on the as-1-like motif by EMSA. Overexpression in M. polymorpha caused severe growth defects requiring active-site cysteines, and GFP fusions colocalized with active RNAPII; shown conserved with Arabidopsis ROXY1.
1 core 0 peripheral
Gutsche, N., et al. (2017)
· Plant Direct research experimental subject
Functionally studied ROXY glutaredoxin: complemented Arabidopsis roxy1-2 flower defect, interacted with MpTGA/PAN by Y2H, BiFC and FRET-FLIM (C-terminal deletion MpROXY1Δ14 abolished binding), and gave redox-dependent supershift on the as-1-like motif by EMSA. Overexpression in M. polymorpha caused severe growth defects requiring active-site cysteines, and GFP fusions colocalized with active RNAPII; shown conserved with Arabidopsis ROXY1.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g10600 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g10600.1 GTCGGGGGCG CCATCCTCTC CTTCTTGTGC CCGCACTGCC CCTCGATCTC TTGAGGACCA AGCCTGCCTG CATAAAGAGC CGGGTTTAGG ACAAGCAATT ACAATCGTCA CAGTTGCTCG CCCCCCCGTC CCACTACACC GATCTTCCAA CCCGCAACTC AACTCGCCCT GCTCCTCCTC CTCCTCCTGC TGCTGCTGCC GCTGCTGCTC GTCCTAAGAC TCAAGCACTT GATTCTCTTT CGTCTCTCTC TATCTCTCTC TCATCGCTTG CCTGTGCCTG TGCTGTGCTG GCTGGGCGAG AAAGCTTATA AACACCCGCT TGCGCTGATC TCTCTCCCTC TTTTCATCAA GAGTCGCGAG TGTTGAAGCG AGTGTCTCCG CGCTGCTGCT GCTGCTGCTA TCCCCTCTAC CTCTCTCTGT GTCTCTCGCT CTCTCTCTGC CTCCCTCTCC TTTCTCTCTT GTCTCCCTTG ACAACATCTG CGAGCTTGAT TGAGCGCTAG TGTTTCTTTA TTGGCGCCTC GCTTGCCTTG GGCTCAGCTG TAGAGTCGAA TAGAGCTCTC TCGCGTCTCG TATCTTCTCC AGTCGGATTG AGCAAGAGCG GATTGGTCTG ATTTGATTTG GAGTCGGCAG ATACTATTCG GCACAGAATC CGTCCTCCTA TTCGGAAGCT GGTTTGATTT CCATCAACGC TCGACTCATC TTGCACACAC TTACCGCAGC CAGCATCACG AGTTTCGTGA CAGCTTTCGG TTTTCGAAAG CGCACTCGGT TGAGTTGTTT GGGTAATCTG TCGGTATCGA AAGAGTAAGC GACCATCAGT CGCATTGGTA GGGAGGGTGC TTTTTCTGCC GGAAGAATTT CTTGAGTTGT CATACGCGTG CCGCAGCCGT AGCAATTTAC AGAGTTGGGT AGAGGCGGAA GAAGAGCACA TAACCAATTC TGCGTCGAGG TGGTTCTGGG AATCCAGCTG TGGTCCGAAT TGAGGTCGTG AGAATATCGC CAATCTCTCG AAACCGAGAT TGTAAAGCAT TAAGAAGGTT CTTTAGCCGA CTTGCGGATT GGAAGAATCG ACTCTGGCGG TGTTCTTGAA ATGGTATCGG TGCTGCGCTC TTGATTGGCT CATTACCGCA GCAGAGAATT CACGTCGGTC TTCGAGGAAG ACTTGTGACA GCACTCGTAT AATACACGCA CGCGAGTCAT ACGCCACTCG TTCACGTGAC GAGTCGCCAG CGCCGACAAT TGACAATCGC ACGGGAGTCT CTGGCAATTT CGCCGTCGCT CGAGAGTCGT GCGCCGCTCG CCCGCTCGAA GAGGAATAGG CGGAAGAGGG GCAGGTTGTG CGTGACGGCA GAGAGAGCGA GAGTAAGTCA CGACGAAGAT TCATATCGCC CGCAGCGGAT TTGAGATGCA GACTCAGACA CAGTCGCTGG GATTCAGCAT GGGAGATAGC CGATGGTCAA TGCAAGGGAT GAGCCAGTTG GATGCCGTGG AGCGAGTGGA AAGATTGGCA GCCGAAAATG CAGTCGTGGT GTTCAGCTTG AGTTCTTGCT GTATGTGCCA TGTGGTGAAG CGCCTGTTCT GCAGTCTGGG AGTGGGCCCC ACGGTGTATG AATTGGATGA CATGAACGGA GGGGCCGAGT TGGAGCGAGC ATTGAGAAAG CTCGTGGGCG ATTCGCAAGC GGTGCCCGCG GTGTTCGTCG GAGGAAAGCT GCTGGGCGGC TTGGATCGAG TGATGGCGGC GCACATCAGC GGGGCTCTGA TCCCGCAGCT CAAAGAAGCC GGAGCGCTGT GGCTTTGAAC CGACGATCGT GGACAGATAA TATTGTGCGC TGCCTTGCCA ATTTTGATTG TTTGATTGAG CCTCCGAACC TCAGTGACTG TAACTCTGCA CTCTTTCTCC GTTCGAGCCC ACACCAACAA CTCTCGCAAT ACTCGAGGCT AGCTCGGCCA ATGTCCAGGC CTTGGAATTT AGTTCGTTCA CATGGCTGAC TAGGCTGTAG CAGCTGAACC TCTTTGTGGA GGTGGTGGTG GTGCTTTCGG CGGTGGTCCC GGCATAATGT GACGCGCAGG CCGTGGGGGA GCGATCGAAG GAAGAGATGA AGCCGTGCAT GGACGCAAGC AGACTCTCGC AGGAGATCGA CAATAACGTG CAGTCTCCCG GTGCTGCTGC TTGCAGAGCA GACGGTCCTG CCATGACTCT GTGCATAGTG ATGCCCCTCG CGCGCTCTCG ATCGCCCTCC CGCACGACCC CGACCTTCTT CACTCACCCC ACTTTCACGA ACAAGATACG CAGAGTGGTA CATGCTTTTG GTCACAGGAT GATTCACGCA TATTATTCAC ATGTACACGC CCATTCTTAG ATTGCTAGGA ATAGCATGAA TTCTCATCAT CTTAGCGAAT TTCAACAAGG ACAATCGGTT ATCACCTTCG GGTATACAAA TCGGACAATG AGCGCGACCT GTACTAGATC AAATTTTTCC AATTAGAACA GGCGTTTTCT TGGGGATTCC GCGGGCCACA CCCTCCTCCC CCACCTGCGG CCTTGAGGTC ATAGATTTTT GTTTGCATTT TCGCCGGTGG GTGGGTGCCT TCAAGCGCAC CCGTGTATCA AACTTTCCCA ACAATTGTGG CTCGTCATAT TTTTTTTCGT GAGAAACACG CTCTTCAC |
mRNA UTR + CDS |
| >Mp5g10600.1 GTCGGGGGCG CCATCCTCTC CTTCTTGTGC CCGCACTGCC CCTCGATCTC TTGAGGACCA AGCCTGCCTG CATAAAGAGC CGGGTTTAGG ACAAGCAATT ACAATCGTCA CAGTTGCTCG CCCCCCCGTC CCACTACACC GATCTTCCAA CCCGCAACTC AACTCGCCCT GCTCCTCCTC CTCCTCCTGC TGCTGCTGCC GCTGCTGCTC GTCCTAAGAC TCAAGCACTT GATTCTCTTT CGTCTCTCTC TATCTCTCTC TCATCGCTTG CCTGTGCCTG TGCTGTGCTG GCTGGGCGAG AAAGCTTATA AACACCCGCT TGCGCTGATC TCTCTCCCTC TTTTCATCAA GAGTCGCGAG TGTTGAAGCG AGTGTCTCCG CGCTGCTGCT GCTGCTGCTA TCCCCTCTAC CTCTCTCTGT GTCTCTCGCT CTCTCTCTGC CTCCCTCTCC TTTCTCTCTT GTCTCCCTTG ACAACATCTG CGAGCTTGAT TGAGCGCTAG TGTTTCTTTA TTGGCGCCTC GCTTGCCTTG GGCTCAGCTG TAGAGTCGAA TAGAGCTCTC TCGCGTCTCG TATCTTCTCC AGTCGGATTG AGCAAGAGCG GATTGGTCTG ATTTGATTTG GAGTCGGCAG ATACTATTCG GCACAGAATC CGTCCTCCTA TTCGGAAGCT GGTTTGATTT CCATCAACGC TCGACTCATC TTGCACACAC TTACCGCAGC CAGCATCACG AGTTTCGTGA CAGCTTTCGG TTTTCGAAAG CGCACTCGGT TGAGTTGTTT GGGTAATCTG TCGGTATCGA AAGAGTAAGC GACCATCAGT CGCATTGGTA GGGAGGGTGC TTTTTCTGCC GGAAGAATTT CTTGAGTTGT CATACGCGTG CCGCAGCCGT AGCAATTTAC AGAGTTGGGT AGAGGCGGAA GAAGAGCACA TAACCAATTC TGCGTCGAGG TGGTTCTGGG AATCCAGCTG TGGTCCGAAT TGAGGTCGTG AGAATATCGC CAATCTCTCG AAACCGAGAT TGTAAAGCAT TAAGAAGGTT CTTTAGCCGA CTTGCGGATT GGAAGAATCG ACTCTGGCGG TGTTCTTGAA ATGGTATCGG TGCTGCGCTC TTGATTGGCT CATTACCGCA GCAGAGAATT CACGTCGGTC TTCGAGGAAG ACTTGTGACA GCACTCGTAT AATACACGCA CGCGAGTCAT ACGCCACTCG TTCACGTGAC GAGTCGCCAG CGCCGACAAT TGACAATCGC ACGGGAGTCT CTGGCAATTT CGCCGTCGCT CGAGAGTCGT GCGCCGCTCG CCCGCTCGAA GAGGAATAGG CGGAAGAGGG GCAGGTTGTG CGTGACGGCA GAGAGAGCGA GAGTAAGTCA CGACGAAGAT TCATATCGCC CGCAGCGGAT TTGAGATGCA GACTCAGACA CAGTCGCTGG GATTCAGCAT GGGAGATAGC CGATGGTCAA TGCAAGGGAT GAGCCAGTTG GATGCCGTGG AGCGAGTGGA AAGATTGGCA GCCGAAAATG CAGTCGTGGT GTTCAGCTTG AGTTCTTGCT GTATGTGCCA TGTGGTGAAG CGCCTGTTCT GCAGTCTGGG AGTGGGCCCC ACGGTGTATG AATTGGATGA CATGAACGGA GGGGCCGAGT TGGAGCGAGC ATTGAGAAAG CTCGTGGGCG ATTCGCAAGC GGTGCCCGCG GTGTTCGTCG GAGGAAAGCT GCTGGGCGGC TTGGATCGAG TGATGGCGGC GCACATCAGC GGGGCTCTGA TCCCGCAGCT CAAAGAAGCC GGAGCGCTGT GGCTTTGAAC CGACGATCGT GGACAGATAA TATTGTGCGC TGCCTTGCCA ATTTTGATTG TTTGATTGAG CCTCCGAACC TCAGTGACTG TAACTCTGCA CTCTTTCTCC GTTCGAGCCC ACACCAACAA CTCTCGCAAT ACTCGAGGCT AGCTCGGCCA ATGTCCAGGC CTTGGAATTT AGTTCGTTCA CATGGCTGAC TAGGCTGTAG CAGCTGAACC TCTTTGTGGA GGTGGTGGTG GTGCTTTCGG CGGTGGTCCC GGCATAATGT GACGCGCAGG CCGTGGGGGA GCGATCGAAG GAAGAGATGA AGCCGTGCAT GGACGCAAGC AGACTCTCGC AGGAGATCGA CAATAACGTG CAGTCTCCCG GTGCTGCTGC TTGCAGAGCA GACGGTCCTG CCATGACTCT GTGCATAGTG ATGCCCCTCG CGCGCTCTCG ATCGCCCTCC CGCACGACCC CGACCTTCTT CACTCACCCC ACTTTCACGA ACAAGATACG CAGAGTGGTA CATGCTTTTG GTCACAGGAT GATTCACGCA TATTATTCAC ATGTACACGC CCATTCTTAG ATTGCTAGGA ATAGCATGAA TTCTCATCAT CTTAGCGAAT TTCAACAAGG ACAATCGGTT ATCACCTTCG GGTATACAAA TCGGACAATG AGCGCGACCT GTACTAGATC AAATTTTTCC AATTAGAACA GGCGTTTTCT TGGGGATTCC GCGGGCCACA CCCTCCTCCC CCACCTGCGG CCTTGAGGTC ATAGATTTTT GTTTGCATTT TCGCCGGTGG GTGGGTGCCT TCAAGCGCAC CCGTGTATCA AACTTTCCCA ACAATTGTGG CTCGTCATAT TTTTTTTCGT GAGAAACACG CTCTTCAC |
CDS |
| >Mp5g10600.1 ATGCAGACTC AGACACAGTC GCTGGGATTC AGCATGGGAG ATAGCCGATG GTCAATGCAA GGGATGAGCC AGTTGGATGC CGTGGAGCGA GTGGAAAGAT TGGCAGCCGA AAATGCAGTC GTGGTGTTCA GCTTGAGTTC TTGCTGTATG TGCCATGTGG TGAAGCGCCT GTTCTGCAGT CTGGGAGTGG GCCCCACGGT GTATGAATTG GATGACATGA ACGGAGGGGC CGAGTTGGAG CGAGCATTGA GAAAGCTCGT GGGCGATTCG CAAGCGGTGC CCGCGGTGTT CGTCGGAGGA AAGCTGCTGG GCGGCTTGGA TCGAGTGATG GCGGCGCACA TCAGCGGGGC TCTGATCCCG CAGCTCAAAG AAGCCGGAGC GCTGTGGCTT TGA |
Protein |
| >Mp5g10600.1 MQTQTQSLGF SMGDSRWSMQ GMSQLDAVER VERLAAENAV VVFSLSSCCM CHVVKRLFCS LGVGPTVYEL DDMNGGAELE RALRKLVGDS QAVPAVFVGG KLLGGLDRVM AAHISGALIP QLKEAGALWL |