Mp5g12310



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
FunFam G3DSA:1.10.510.10:FF:000108 L-type lectin-domain containing receptor kinase S.4
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
FunFam G3DSA:3.30.200.20:FF:000168 L-type lectin-domain containing receptor kinase IX.1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00139 Legume lectin domain
CDD cd14066 STKc_IRAK
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
CDD cd06899 lectin_legume_LecRK_Arcelin_ConA
PANTHER PTHR27007 -
Gene3D G3DSA:2.60.120.200 -
Pfam PF00069 Protein kinase domain
SMART SM00220 serkin_6
ProSiteProfiles PS50011 Protein kinase domain profile.
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0092s0075 -
GO GO:0005524 ATP binding
GO GO:0030246 carbohydrate binding
GO GO:0005886 plasma membrane
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_L-LEC23 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp5g12310.1 chr5:16356545..16360173 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g12310 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g12310 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.