Mp5g13220



Description

Annotation

Database ID Description
PANTHER PTHR24223 ATP-BINDING CASSETTE SUB-FAMILY C
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
SUPERFAMILY SSF90123 ABC transporter transmembrane region
ProSitePatterns PS00211 ABC transporters family signature.
SMART SM00382 AAA_5
FunFam G3DSA:3.40.50.300:FF:000169 ABC transporter C family member 3
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.20.1560.10:FF:000003 ABC transporter C family member 10
Gene3D G3DSA:1.20.1560.10 ABC transporter type 1, transmembrane domain
Gene3D G3DSA:3.40.50.300 -
Pfam PF00005 ABC transporter
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00664 ABC transporter transmembrane region
CDD cd03250 ABCC_MRP_domain1
CDD cd18580 ABC_6TM_ABCC_D2
CDD cd03244 ABCC_MRP_domain2
CDD cd18579 ABC_6TM_ABCC_D1
FunFam G3DSA:1.20.1560.10:FF:000002 ABC transporter C family member 5
FunFam G3DSA:3.40.50.300:FF:000508 ABC transporter C family member 5
KOG KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [Q]
MapolyID Mapoly0032s0016 -

Nomenclature

Gene symbol Product Transcript ID Status
MpABCC12 ABC transporters Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp5g13220.1 chr5:17459203..17467776 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13220.2 chr5:17459203..17467776 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13220.3 chr5:17460173..17467776 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp5g13220.4 chr5:17460203..17467776 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.