Mp5g15320



Description

Annotation

Database ID Description
ProSitePatterns PS00498 Tyrosinase and hemocyanins CuB-binding region signature.
SUPERFAMILY SSF48056 Di-copper centre-containing domain
Pfam PF12142 Polyphenol oxidase middle domain
Gene3D G3DSA:1.10.1280.10 -
Pfam PF12143 Protein of unknown function (DUF_B2219)
PRINTS PR00092 Tyrosinase copper-binding domain signature
PANTHER PTHR11474 TYROSINASE FAMILY MEMBER
Pfam PF00264 Common central domain of tyrosinase
KEGG K00422 polyphenol oxidase [EC:1.10.3.1]
MapolyID Mapoly0071s0078 -
GO GO:0004097 catechol oxidase activity
GO GO:0016491 oxidoreductase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpPPO17 Secondary metabolism enzyme Provisional

Associated Literature (AI-based literature mining, Beta-version)

Polyphenol oxidase detected by MS as a major abundant cell wall protein; first report of such proteins in a cell wall proteome (Table 3).

1 core 0 peripheral

Kolkas, H., et al. (2022) · Frontiers in Plant Science  research experimental subject
Polyphenol oxidase detected by MS as a major abundant cell wall protein; first report of such proteins in a cell wall proteome (Table 3).

Transcript models

Transcript ID Location Sequences Extract region
Mp5g15320.1 chr5:19444406..19447188 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g15320 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g15320 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.