Mp5g15770



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF19055 ABC-2 type transporter
ProSitePatterns PS00211 ABC transporters family signature.
SMART SM00382 AAA_5
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
Gene3D G3DSA:3.40.50.300 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF01061 ABC-2 type transporter
Pfam PF00005 ABC transporter
PANTHER PTHR48041 ABC TRANSPORTER G FAMILY MEMBER 28
KEGG K05681 ATP-binding cassette, subfamily G (WHITE), member 2
KOG KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein); [Q]
MapolyID Mapoly0071s0033 -
GO GO:0055085 transmembrane transport
GO GO:0042626 ATPase-coupled transmembrane transporter activity
GO GO:0005524 ATP binding
GO GO:0140359 ABC-type transporter activity
GO GO:0016887 ATP hydrolysis activity
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpABCG22 ABC transporter Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp5g15770.1 chr5:19872896..19877724 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g15770 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g15770 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.