Mp5g16550
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF51182 | RmlC-like cupins |
| Pfam | PF00190 | Cupin |
| SMART | SM00835 | Cupin_1_3 |
| FunFam | G3DSA:2.60.120.10:FF:000025 | germin-like protein subfamily 2 member 1 |
| CDD | cd02241 | cupin_OxOx |
| PRINTS | PR00325 | Germin signature |
| PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
| MapolyID | Mapoly0117s0051 | - |
| GO | GO:0030145 | manganese ion binding |
| GO | GO:0005618 | cell wall |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCupin85 | Cupin | Provisional |
This is a provisional entry. If you want to update the entry, please contact the administrator.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g16550 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g16550.1 CTGTTACGGT AAGTGCGCTG AATTCTTCAC CACCGCTACC TTCACTTCTA CACAAACTTA GAAACAAGGT GTATAAATTC CCAAGCCTTT CAGTTCATAA TCAGAGCTCC AGTCTATCTG TAGGATTGCC GTTATCGTTC ATCTATAACA GTCAGTCCAA TTTCCAGAAA AAAATCTGAG TGTCAGTGTG ACTTCCAGTT TCCGTGCATT TCTTATCCCG AGCTTGCCTG CAGCTTGAAG TTTGTGCTGA TTTTTTTCCT AGCTTGGAGG TTGGGGCAGT TTTCGAGTTC AAATCTTCAA GATCCATTGT ACTAAGTGAT GGGATTTGTG CGCATCATGG GCCCTGCGTG TTGGCAATTG GTTTTGTTGA CGATGTTCAT ACTGGCGGGA AGTGCTGTCC AAGCAGCTGA TTCAGATCAA CTCCAAGATT TCTGTGTTGC AGACCTTAGT CAGAAAAAGT TTACGAATGG GTACCTCTGC AAGGATCCGG CAACAGCGAA GACAGAAGAT TTCATGTACA AAGGCCTGAA GGATGCCAGC ATCATCACTT CTGAAAATCC CTGGGGTGCT TCGGCAAGAC TAGCCTTCGC CCGTCATTGG CCAGCTTTGA ACACGCTTGG AGTTGCTATG GCTCGCCTTG ATCTCATGCC AGGTGGTGTC ATTGCGCCTC ACACTCACAA CCTGGCCACT GAGGTTGTGT TCGTTACATC CGGAGAGATA TACATCGGAT TCGTGGCCAA CAGTGACGAT GCGAATGCTC CCAACAAGCT GTTCGCTGGG ATGCTCAAGA CCGGCGAGGC GTTCGTTATC CCCAGAGGCT TGGTGCACTT CCAGATGAAC AAAGGAACTG TCAATGCTTC CACCATCAAC TTCTTGAATT CTCAAAATCC AGGAATCTCA TTTCTCCCTC TCACTCTGTT TGGAGCACAG CCAGCTGTGG ATCCGGCCTT GCTGGCCAGG TCTTTCGCAG TCAACGAAAC CTCAATCTCT CCTCTGGAAA CTTTCTGGTC GCAATTCACC AATGCTTTCC TCTGAGCCTT AGAAGCTCAT AGGGACTCCG TAGACTGGCT AGACAGTGCT TGTACGCATA TATGATGTGA TAGTCAGAGG TCCACATTGA TAGAAATATC AACAATAGCT TGTAATTTCC AGACCTTACT CTTTGTCCAC ATATGGCTGA GAAGAAGGCA GCAGTAGAGA TTCTGATACG ATAAATACAT ATGAAATGAG GACAGGTGAA CTATCAGGAG AAAAATGGCT AAATTGACTT CTTTATGGAA TTCACATCAA GCAGTAATGG CCTTGTTTAG AAACGTAGAA GGTAATAAAT CAGCTGCAGC CATACCTTCG AACTACATAT TCTACGTCTA TGTATTTCAC AATCTAAACA CCTTAACAAC ATCGGCTTGA ACTCGGGAGT CATTATCTTC TCTGGCGAAC TTCAAAGGGC ATCCAACTAA TGATCGATAA TTTCACAAAT GAGTGAGAAC TCGGCCGCAA TCTGACTCTG TAAATTCTAA TTCCTTCTAA TATTGCTTAA GTTCATGCTT CTGAAAGGGT ATAACTAGAG ACACACGAAG CCTCTTGAGT CAACATCAGG GCTGTTTCTT GTCAAAATTG CGACTTTATA TAGATTTGGT A |
mRNA UTR + CDS |
| >Mp5g16550.1 CTGTTACGGT AAGTGCGCTG AATTCTTCAC CACCGCTACC TTCACTTCTA CACAAACTTA GAAACAAGGT GTATAAATTC CCAAGCCTTT CAGTTCATAA TCAGAGCTCC AGTCTATCTG TAGGATTGCC GTTATCGTTC ATCTATAACA GTCAGTCCAA TTTCCAGAAA AAAATCTGAG TGTCAGTGTG ACTTCCAGTT TCCGTGCATT TCTTATCCCG AGCTTGCCTG CAGCTTGAAG TTTGTGCTGA TTTTTTTCCT AGCTTGGAGG TTGGGGCAGT TTTCGAGTTC AAATCTTCAA GATCCATTGT ACTAAGTGAT GGGATTTGTG CGCATCATGG GCCCTGCGTG TTGGCAATTG GTTTTGTTGA CGATGTTCAT ACTGGCGGGA AGTGCTGTCC AAGCAGCTGA TTCAGATCAA CTCCAAGATT TCTGTGTTGC AGACCTTAGT CAGAAAAAGT TTACGAATGG GTACCTCTGC AAGGATCCGG CAACAGCGAA GACAGAAGAT TTCATGTACA AAGGCCTGAA GGATGCCAGC ATCATCACTT CTGAAAATCC CTGGGGTGCT TCGGCAAGAC TAGCCTTCGC CCGTCATTGG CCAGCTTTGA ACACGCTTGG AGTTGCTATG GCTCGCCTTG ATCTCATGCC AGGTGGTGTC ATTGCGCCTC ACACTCACAA CCTGGCCACT GAGGTTGTGT TCGTTACATC CGGAGAGATA TACATCGGAT TCGTGGCCAA CAGTGACGAT GCGAATGCTC CCAACAAGCT GTTCGCTGGG ATGCTCAAGA CCGGCGAGGC GTTCGTTATC CCCAGAGGCT TGGTGCACTT CCAGATGAAC AAAGGAACTG TCAATGCTTC CACCATCAAC TTCTTGAATT CTCAAAATCC AGGAATCTCA TTTCTCCCTC TCACTCTGTT TGGAGCACAG CCAGCTGTGG ATCCGGCCTT GCTGGCCAGG TCTTTCGCAG TCAACGAAAC CTCAATCTCT CCTCTGGAAA CTTTCTGGTC GCAATTCACC AATGCTTTCC TCTGAGCCTT AGAAGCTCAT AGGGACTCCG TAGACTGGCT AGACAGTGCT TGTACGCATA TATGATGTGA TAGTCAGAGG TCCACATTGA TAGAAATATC AACAATAGCT TGTAATTTCC AGACCTTACT CTTTGTCCAC ATATGGCTGA GAAGAAGGCA GCAGTAGAGA TTCTGATACG ATAAATACAT ATGAAATGAG GACAGGTGAA CTATCAGGAG AAAAATGGCT AAATTGACTT CTTTATGGAA TTCACATCAA GCAGTAATGG CCTTGTTTAG AAACGTAGAA GGTAATAAAT CAGCTGCAGC CATACCTTCG AACTACATAT TCTACGTCTA TGTATTTCAC AATCTAAACA CCTTAACAAC ATCGGCTTGA ACTCGGGAGT CATTATCTTC TCTGGCGAAC TTCAAAGGGC ATCCAACTAA TGATCGATAA TTTCACAAAT GAGTGAGAAC TCGGCCGCAA TCTGACTCTG TAAATTCTAA TTCCTTCTAA TATTGCTTAA GTTCATGCTT CTGAAAGGGT ATAACTAGAG ACACACGAAG CCTCTTGAGT CAACATCAGG GCTGTTTCTT GTCAAAATTG CGACTTTATA TAGATTTGGT A |
CDS |
| >Mp5g16550.1 ATGGGATTTG TGCGCATCAT GGGCCCTGCG TGTTGGCAAT TGGTTTTGTT GACGATGTTC ATACTGGCGG GAAGTGCTGT CCAAGCAGCT GATTCAGATC AACTCCAAGA TTTCTGTGTT GCAGACCTTA GTCAGAAAAA GTTTACGAAT GGGTACCTCT GCAAGGATCC GGCAACAGCG AAGACAGAAG ATTTCATGTA CAAAGGCCTG AAGGATGCCA GCATCATCAC TTCTGAAAAT CCCTGGGGTG CTTCGGCAAG ACTAGCCTTC GCCCGTCATT GGCCAGCTTT GAACACGCTT GGAGTTGCTA TGGCTCGCCT TGATCTCATG CCAGGTGGTG TCATTGCGCC TCACACTCAC AACCTGGCCA CTGAGGTTGT GTTCGTTACA TCCGGAGAGA TATACATCGG ATTCGTGGCC AACAGTGACG ATGCGAATGC TCCCAACAAG CTGTTCGCTG GGATGCTCAA GACCGGCGAG GCGTTCGTTA TCCCCAGAGG CTTGGTGCAC TTCCAGATGA ACAAAGGAAC TGTCAATGCT TCCACCATCA ACTTCTTGAA TTCTCAAAAT CCAGGAATCT CATTTCTCCC TCTCACTCTG TTTGGAGCAC AGCCAGCTGT GGATCCGGCC TTGCTGGCCA GGTCTTTCGC AGTCAACGAA ACCTCAATCT CTCCTCTGGA AACTTTCTGG TCGCAATTCA CCAATGCTTT CCTCTGA |
Protein |
| >Mp5g16550.1 MGFVRIMGPA CWQLVLLTMF ILAGSAVQAA DSDQLQDFCV ADLSQKKFTN GYLCKDPATA KTEDFMYKGL KDASIITSEN PWGASARLAF ARHWPALNTL GVAMARLDLM PGGVIAPHTH NLATEVVFVT SGEIYIGFVA NSDDANAPNK LFAGMLKTGE AFVIPRGLVH FQMNKGTVNA STINFLNSQN PGISFLPLTL FGAQPAVDPA LLARSFAVNE TSISPLETFW SQFTNAFL |