Mp5g16560
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SMART | SM00257 | LysM_2 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases |
| SUPERFAMILY | SSF54106 | LysM domain |
| CDD | cd00118 | LysM |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases |
| Gene3D | G3DSA:3.10.350.10 | LysM domain |
| Pfam | PF01476 | LysM domain |
| Pfam | PF00704 | Glycosyl hydrolases family 18 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. |
| PRINTS | PR00551 | 2-S globulin family signature |
| PANTHER | PTHR46476 | CHITINASE 2-LIKE |
| ProSiteProfiles | PS51782 | LysM domain profile. |
| KOG | KOG2806 | Chitinase; N-term missing; C-term missing; [G] |
| MapolyID | Mapoly0117s0050 | - |
| GO | GO:0005975 | carbohydrate metabolic process |
| GO | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGH18.7 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g16560 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g16560.1 GCATTCCAAG ATTTGACTCT TTTGATATTC AAAATCGCCG CAACAAATTC CTGCTTGATT CGCCAGAAGA GTTAATGTTG ATGAATGTCC AACTTGCGTG CGTGTCATGG TCTGACAGAG CACTAAATTT CTCGCTGCAT TTCCCTCGGA CCCCCTTGTA CATACGATCA TTCGGTGTTG GACGGTAGAC GACTCGAGGG CTTTTCTACG CCAACGAGAA CTGTAATGAA GTAGTTGATC ATCGCCGGGT CCAGTGAAGC CATCAGGCTG CTCAGAGTGC AAACAAGAGA TTGGGAATAA CTTTGCCGGA ATGGGCCAAA ACAAGCGAAT TTGTAATAGA CAGGGCAGTA GGCTTTTACA CTGCTTATAG CGAAGGTGAC AAAAGCCGTT ACGAGATTTA ATACTTTCTC GAGAGCATGA ACCGGAGTGC AGTCTATCGG GTCGCTGGGG CGAGTGATCA GGATAAGACA TTCGGCGATG GATGGAGCGG CACTTTTCTC CCTCGAGCGA CCGACAGAGG AAGCCCGTCA AGTGTCAAGT TTTTGTTCGA GTGATTGCAA AGTCTGTGAC ACGAGCAGTG CAGTTCTCCC TATGTGATAA TGGCCCAGAG TCGAATGCAG CTGGGGGAGT ACGTGGTACA CACCTCTTAG CACGGCAATT ACGTCTTTGA CGTAGACATC TCGCACTTGC AGCAAGCTTT CAGCATACAG CAGATCCTGC CAGGAAGAAA AGATGTATTC TGTAAAGCCG AACACTTTTT ACAATCTCCT TTCCGGCCTG CAGGACGACA TGAGCTCACG GGCTTACTTT TACTCTCAAG AAGCCACATA GTGCTGCACT TCTAAGTGCC ACGAATCGTG GCGCACTTGC ATTCTGCCAT CAGTCTGCCC CACTCCTCAT GACATTTTTC GACATGGTTC GACCTCCACT CCAGTGGGCC TGAAGGGTCG AGAAAGGTCC GAGTCTGCAG GCAAAATTTT CTCCTTCTCT CTGCACTCCA TATTCGGGCT CGTTCTTTCT CGAATTTCAG AAACGGATCT CGAGCATTTC TGCAACTGCT CTGTCCCAAT GCGGTGTTAA TGGCAGAGCA ATTTGGCCCA CCTCATCCTC TGGACCGGAT GTATTGAGTG TCTTCGCGAC GGTGGAGAGA TCAGGGAAGA CAGAGGGTGA GGCAATCGAT GGCCCTGTAC TTAATGCTCT GTAGACCGGA CATTGAAGAT CACCCACACT TTCCAGGATT CCGTCCGAGG TCACCTTTCC CGATCGCATG CATCTCGTCT TCCGAACTCC GTCACAGTCC GGGAGCTCGC TCTTGCATCG TCGGGGCAAG GTGCTGAATT ACCCCCTATG TTGGCCCCTG CCTATTGTCG GGCCTAGACG GCAAGAGCAA CGTGCTGAAT GGCAACCTAT GTCGCCCCCG CCTGCTCTCG AGCCTATCAT ACTTTCCCTC ACTTGCCTCT CTGGTGCGCT CCGAGACGTC CCAGTCGGCA TATTTCGACA TAAAATATTG CGCATCCGTG CGGAGTCCAA ATATTTTAAC TTATACGTAG CCTGCGAGAA TGTTTGAAGA AGATGCTCCG CCGTAGATTC CAAATCCGTC CAGGTTTAAG CGAGTCTGAG CACTGCTTCA GTCATTCCAG AGATGCAATC CTCGGAGGGA ATTGCGGTTT TCGTGCGCGG ACGACAACGG AACCTTCACA ACCGGAGCAC CCTTGTGTCG AAGAGTAGGA ATCCGGGATC TGTGAGGCTA GGAAACCTCA GTCTTCTATT TCTGTTCGCT GTGTACCCCA GCTTCTGCCA TGGCTTGTCC AGTTCCGACG AAGGTGAGTG CTCTCTCGGT CTTCGGCATA ATTATTGCAC TCAGTTGGCA CATACTAATC GATCATCATT CTGTCAGTTC AAATGGTCGA TCGTCTCCTG TGATGATTCC ACCGACTGAT TAACCTGGAC TGAGATGAAT TCGATAACTG CTAGAGGATT TTGCTTCATA GATGCAAGAG CCTACAATTT TGGCGGAGCT GGCGCTGTAG TTTCGAATGC AGCAGCTCGT CTCAGTCGCT GAGTAGTAAT TGTGCATGCA TGCCTCGGCC CTCCTGGAAG CTTTTAATTT TTCTCGCAGA TATTGTCTTA TGACTGAGCA AAATTGACGC GCGAGTGTGT GATTACCTCA GGCTCATTCA CTTCGTATAC CAGCAAGGGC AGTAATTGTC TGCACGCGCA CTCCGTAAGC GCAGGGGACT CTTGTACTTC CATTCGCCTG AGCAGCAATG TCACTCAGGC TCAGCTGCTG TTGTTGAATC CGGACCTCAA CTGCAAAAAA TTAAATGCCG GGCAGTCTCT GTGCGTGCAA GGAATTCCGC CCAACTGCAA GAAAAAAATC AGAGTGTTCC GCGGCAACAA CAGTGCCGGA GGCTGCGAAG AAATTGCAGC CATAGCCGAA TTGACACCCC CGGAGCTACT ATCCATCAAT CCGGGTCTAA TCTGCCCAGA CTCGGAAAAT CAGAGTAGCG TCTGGTCGAG CTCCCGAGAG GTTTGCGTAG CCAGGGGGCC TGGCAGCGTT TTCATCGAGT ACATGGGGGC GTCCGGCAAG TCCATCTCGT TCGACGACAT GCAAGCGGTC GTGAACGCGT CCAAGGCCGT GTTCCATGTA GCCTTAGGTT TCGTGATCGA TTACGACCGT GACGGGAACT ATAAGAACGG CACGTTTTCC AAATTCTGGA ACGATGATCT GACACCTGCA TCCGCCAAAG CTTTTAAGAA GAAGAATCCT GGAGTCCGGC TGCTGATGAG TTTGGGAGGA GACTCTTTGT GGGTGAACGA CAGTCTGACC GTGGACGTGG ACTGGTTGGA CCCTCCTGAT CCCGAAGCTT GGATAGACAA TGCTCAGGCG TCGCTGACAG GTCTCGCCGA GCTCTACAAT ATCGACGGGA TCGACATCGA CTTCGAGCAC TTCCCGGCGG ACTACTCTGT TTCGAATTCC GCCTTCACTT TCTGCATCGG TACGTTGATT CAGAAGCTCA AAGACAACAA TACCATCGGC ATTGCGACCA TCGCTCCTTT CGGATCCGTT ATGCCGCAGT ACCAAGACCT CATGGCCAAT TTCGGCGATC TCATCGACTA CATCAGCTTC CAGTTCTACG CCTACGACTT GCCCACCACA GCCGACTACG TTCAAACCTT CCGAGCGACC ACGCTCTTTT TTGATCCGGC CAAGCTCCTC GCCAGCACAC AGATCAACGG CACGCGCAGC ATTACGGGAA CGCAGTTTCG AAATGCTGTA AATTTGTTGC AGGAGGAAGA TGGCCTTCTG GGGGTGATGC TGTATGACGC TGACGCCTCT AGAAGTCTAA ATTTCGCGGA AGAGAAAGGC GTTCTTGCTC TGATTCCTGG ACCATACGAT GGATCCCTTC CTGCTCCGAC TCCCCCTCCA CCACCTTTGT CTCAAGGTAA CCAGGAACTC TGATCACTCA CGCTCAATTA TCACTCAACT CCGAAATCAT CGCACAGGCC TCCGTCCCGA GCCTTCTCTG CTCTGTCCAG GCTAATGTAT TCCATTTTCT CGTCTCGAGC AGTTGTCGCA CGCTTTAAGA TCTCCTATAC TTTGCCAGTT TCCAGCTCCA GGCCGATTTC CACATCCGTC GTTTTGTAGC TGCGCACTTA AAACTTAAAA CAAGCAGCAA TTCCCGTTTC AGCACGAGAC CCGAGTCTAC TCTGCTGGTC ACTTATCTGT AATCTGAAAA TGAACCTGAT CAGGCCCTCT GTAACCCTTC AGACGATCAT GGATGTACTC CATGAACGCA TGACCTTCAT ATTGTTTCAG AAGCATTGCC GCTGTTTGTT CTGAATAATG ATCTGACTTT GCGAGTGTCA TCCACATGAT ACTAAATTGA GACCGACCTG AAGTTTCGTT CGGATGCCTG TGTTTCTCCA GGAAGGAGAT CGTCTGACGA CAGTTTTCAG CGGCGATGGC TGCTGACCTT CAGTTTTTGG GTTGCAGTAG TCATGTACAA TATCCTCCAC ACGTAATCTA CAGGATAGGT GGGTTTTGGC CAAGCGGATT GCACTGTTGC GATTTTGATC TGGACTCTTG CTATCTCTTT CATCCACATA AGTGGAAAGA AGATTGATTC CAAATTTAGC TCAGCTCTGC TCTCTAATGT CTCCAGTGAT ATAAGGAAAC AAGGGCAAAC CAGGACCAAA GTTGGAACAG TGCTTTTGTT AGACATTTCC TGAAAGTTGT GGGCCTCTCA AGACAAGATC CGAGCAAACT AGGACACATG CAATTTCTTC ATGGAACCGG AGTATACTTA CAGAATCGAG TCTAGTGATT CTACTTCATT TCGAGTTCAA TTCGAACTGT TGAATAATAT AAGAAAAAAT ACACATTCTC CTGGCCAAGA CCGG |
mRNA UTR + CDS |
| >Mp5g16560.1 GCATTCCAAG ATTTGACTCT TTTGATATTC AAAATCGCCG CAACAAATTC CTGCTTGATT CGCCAGAAGA GTTAATGTTG ATGAATGTCC AACTTGCGTG CGTGTCATGG TCTGACAGAG CACTAAATTT CTCGCTGCAT TTCCCTCGGA CCCCCTTGTA CATACGATCA TTCGGTGTTG GACGGTAGAC GACTCGAGGG CTTTTCTACG CCAACGAGAA CTGTAATGAA GTAGTTGATC ATCGCCGGGT CCAGTGAAGC CATCAGGCTG CTCAGAGTGC AAACAAGAGA TTGGGAATAA CTTTGCCGGA ATGGGCCAAA ACAAGCGAAT TTGTAATAGA CAGGGCAGTA GGCTTTTACA CTGCTTATAG CGAAGGTGAC AAAAGCCGTT ACGAGATTTA ATACTTTCTC GAGAGCATGA ACCGGAGTGC AGTCTATCGG GTCGCTGGGG CGAGTGATCA GGATAAGACA TTCGGCGATG GATGGAGCGG CACTTTTCTC CCTCGAGCGA CCGACAGAGG AAGCCCGTCA AGTGTCAAGT TTTTGTTCGA GTGATTGCAA AGTCTGTGAC ACGAGCAGTG CAGTTCTCCC TATGTGATAA TGGCCCAGAG TCGAATGCAG CTGGGGGAGT ACGTGGTACA CACCTCTTAG CACGGCAATT ACGTCTTTGA CGTAGACATC TCGCACTTGC AGCAAGCTTT CAGCATACAG CAGATCCTGC CAGGAAGAAA AGATGTATTC TGTAAAGCCG AACACTTTTT ACAATCTCCT TTCCGGCCTG CAGGACGACA TGAGCTCACG GGCTTACTTT TACTCTCAAG AAGCCACATA GTGCTGCACT TCTAAGTGCC ACGAATCGTG GCGCACTTGC ATTCTGCCAT CAGTCTGCCC CACTCCTCAT GACATTTTTC GACATGGTTC GACCTCCACT CCAGTGGGCC TGAAGGGTCG AGAAAGGTCC GAGTCTGCAG GCAAAATTTT CTCCTTCTCT CTGCACTCCA TATTCGGGCT CGTTCTTTCT CGAATTTCAG AAACGGATCT CGAGCATTTC TGCAACTGCT CTGTCCCAAT GCGGTGTTAA TGGCAGAGCA ATTTGGCCCA CCTCATCCTC TGGACCGGAT GTATTGAGTG TCTTCGCGAC GGTGGAGAGA TCAGGGAAGA CAGAGGGTGA GGCAATCGAT GGCCCTGTAC TTAATGCTCT GTAGACCGGA CATTGAAGAT CACCCACACT TTCCAGGATT CCGTCCGAGG TCACCTTTCC CGATCGCATG CATCTCGTCT TCCGAACTCC GTCACAGTCC GGGAGCTCGC TCTTGCATCG TCGGGGCAAG GTGCTGAATT ACCCCCTATG TTGGCCCCTG CCTATTGTCG GGCCTAGACG GCAAGAGCAA CGTGCTGAAT GGCAACCTAT GTCGCCCCCG CCTGCTCTCG AGCCTATCAT ACTTTCCCTC ACTTGCCTCT CTGGTGCGCT CCGAGACGTC CCAGTCGGCA TATTTCGACA TAAAATATTG CGCATCCGTG CGGAGTCCAA ATATTTTAAC TTATACGTAG CCTGCGAGAA TGTTTGAAGA AGATGCTCCG CCGTAGATTC CAAATCCGTC CAGGTTTAAG CGAGTCTGAG CACTGCTTCA GTCATTCCAG AGATGCAATC CTCGGAGGGA ATTGCGGTTT TCGTGCGCGG ACGACAACGG AACCTTCACA ACCGGAGCAC CCTTGTGTCG AAGAGTAGGA ATCCGGGATC TGTGAGGCTA GGAAACCTCA GTCTTCTATT TCTGTTCGCT GTGTACCCCA GCTTCTGCCA TGGCTTGTCC AGTTCCGACG AAGGCTCATT CACTTCGTAT ACCAGCAAGG GCAGTAATTG TCTGCACGCG CACTCCGTAA GCGCAGGGGA CTCTTGTACT TCCATTCGCC TGAGCAGCAA TGTCACTCAG GCTCAGCTGC TGTTGTTGAA TCCGGACCTC AACTGCAAAA AATTAAATGC CGGGCAGTCT CTGTGCGTGC AAGGAATTCC GCCCAACTGC AAGAAAAAAA TCAGAGTGTT CCGCGGCAAC AACAGTGCCG GAGGCTGCGA AGAAATTGCA GCCATAGCCG AATTGACACC CCCGGAGCTA CTATCCATCA ATCCGGGTCT AATCTGCCCA GACTCGGAAA ATCAGAGTAG CGTCTGGTCG AGCTCCCGAG AGGTTTGCGT AGCCAGGGGG CCTGGCAGCG TTTTCATCGA GTACATGGGG GCGTCCGGCA AGTCCATCTC GTTCGACGAC ATGCAAGCGG TCGTGAACGC GTCCAAGGCC GTGTTCCATG TAGCCTTAGG TTTCGTGATC GATTACGACC GTGACGGGAA CTATAAGAAC GGCACGTTTT CCAAATTCTG GAACGATGAT CTGACACCTG CATCCGCCAA AGCTTTTAAG AAGAAGAATC CTGGAGTCCG GCTGCTGATG AGTTTGGGAG GAGACTCTTT GTGGGTGAAC GACAGTCTGA CCGTGGACGT GGACTGGTTG GACCCTCCTG ATCCCGAAGC TTGGATAGAC AATGCTCAGG CGTCGCTGAC AGGTCTCGCC GAGCTCTACA ATATCGACGG GATCGACATC GACTTCGAGC ACTTCCCGGC GGACTACTCT GTTTCGAATT CCGCCTTCAC TTTCTGCATC GGTACGTTGA TTCAGAAGCT CAAAGACAAC AATACCATCG GCATTGCGAC CATCGCTCCT TTCGGATCCG TTATGCCGCA GTACCAAGAC CTCATGGCCA ATTTCGGCGA TCTCATCGAC TACATCAGCT TCCAGTTCTA CGCCTACGAC TTGCCCACCA CAGCCGACTA CGTTCAAACC TTCCGAGCGA CCACGCTCTT TTTTGATCCG GCCAAGCTCC TCGCCAGCAC ACAGATCAAC GGCACGCGCA GCATTACGGG AACGCAGTTT CGAAATGCTG TAAATTTGTT GCAGGAGGAA GATGGCCTTC TGGGGGTGAT GCTGTATGAC GCTGACGCCT CTAGAAGTCT AAATTTCGCG GAAGAGAAAG GCGTTCTTGC TCTGATTCCT GGACCATACG ATGGATCCCT TCCTGCTCCG ACTCCCCCTC CACCACCTTT GTCTCAAGGA AGGAGATCGT CTGACGACAG TTTTCAGCGG CGATGGCTGC TGACCTTCAG TTTTTGGGTT GCAGTAGTCA TGTACAATAT CCTCCACACG TAATCTACAG GATAGGTGGG TTTTGGCCAA GCGGATTGCA CTGTTGCGAT TTTGATCTGG ACTCTTGCTA TCTCTTTCAT CCACATAAGT GGAAAGAAGA TTGATTCCAA ATTTAGCTCA GCTCTGCTCT CTAATGTCTC CAGTGATATA AGGAAACAAG GGCAAACCAG GACCAAAGTT GGAACAGTGC TTTTGTTAGA CATTTCCTGA AAGTTGTGGG CCTCTCAAGA CAAGATCCGA GCAAACTAGG ACACATGCAA TTTCTTCATG GAACCGGAGT ATACTTACAG AATCGAGTCT AGTGATTCTA CTTCATTTCG AGTTCAATTC GAACTGTTGA ATAATATAAG AAAAAATACA CATTCTCCTG GCCAAGACCG G |
CDS |
| >Mp5g16560.1 ATGCAATCCT CGGAGGGAAT TGCGGTTTTC GTGCGCGGAC GACAACGGAA CCTTCACAAC CGGAGCACCC TTGTGTCGAA GAGTAGGAAT CCGGGATCTG TGAGGCTAGG AAACCTCAGT CTTCTATTTC TGTTCGCTGT GTACCCCAGC TTCTGCCATG GCTTGTCCAG TTCCGACGAA GGCTCATTCA CTTCGTATAC CAGCAAGGGC AGTAATTGTC TGCACGCGCA CTCCGTAAGC GCAGGGGACT CTTGTACTTC CATTCGCCTG AGCAGCAATG TCACTCAGGC TCAGCTGCTG TTGTTGAATC CGGACCTCAA CTGCAAAAAA TTAAATGCCG GGCAGTCTCT GTGCGTGCAA GGAATTCCGC CCAACTGCAA GAAAAAAATC AGAGTGTTCC GCGGCAACAA CAGTGCCGGA GGCTGCGAAG AAATTGCAGC CATAGCCGAA TTGACACCCC CGGAGCTACT ATCCATCAAT CCGGGTCTAA TCTGCCCAGA CTCGGAAAAT CAGAGTAGCG TCTGGTCGAG CTCCCGAGAG GTTTGCGTAG CCAGGGGGCC TGGCAGCGTT TTCATCGAGT ACATGGGGGC GTCCGGCAAG TCCATCTCGT TCGACGACAT GCAAGCGGTC GTGAACGCGT CCAAGGCCGT GTTCCATGTA GCCTTAGGTT TCGTGATCGA TTACGACCGT GACGGGAACT ATAAGAACGG CACGTTTTCC AAATTCTGGA ACGATGATCT GACACCTGCA TCCGCCAAAG CTTTTAAGAA GAAGAATCCT GGAGTCCGGC TGCTGATGAG TTTGGGAGGA GACTCTTTGT GGGTGAACGA CAGTCTGACC GTGGACGTGG ACTGGTTGGA CCCTCCTGAT CCCGAAGCTT GGATAGACAA TGCTCAGGCG TCGCTGACAG GTCTCGCCGA GCTCTACAAT ATCGACGGGA TCGACATCGA CTTCGAGCAC TTCCCGGCGG ACTACTCTGT TTCGAATTCC GCCTTCACTT TCTGCATCGG TACGTTGATT CAGAAGCTCA AAGACAACAA TACCATCGGC ATTGCGACCA TCGCTCCTTT CGGATCCGTT ATGCCGCAGT ACCAAGACCT CATGGCCAAT TTCGGCGATC TCATCGACTA CATCAGCTTC CAGTTCTACG CCTACGACTT GCCCACCACA GCCGACTACG TTCAAACCTT CCGAGCGACC ACGCTCTTTT TTGATCCGGC CAAGCTCCTC GCCAGCACAC AGATCAACGG CACGCGCAGC ATTACGGGAA CGCAGTTTCG AAATGCTGTA AATTTGTTGC AGGAGGAAGA TGGCCTTCTG GGGGTGATGC TGTATGACGC TGACGCCTCT AGAAGTCTAA ATTTCGCGGA AGAGAAAGGC GTTCTTGCTC TGATTCCTGG ACCATACGAT GGATCCCTTC CTGCTCCGAC TCCCCCTCCA CCACCTTTGT CTCAAGGAAG GAGATCGTCT GACGACAGTT TTCAGCGGCG ATGGCTGCTG ACCTTCAGTT TTTGGGTTGC AGTAGTCATG TACAATATCC TCCACACGTA A |
Protein |
| >Mp5g16560.1 MQSSEGIAVF VRGRQRNLHN RSTLVSKSRN PGSVRLGNLS LLFLFAVYPS FCHGLSSSDE GSFTSYTSKG SNCLHAHSVS AGDSCTSIRL SSNVTQAQLL LLNPDLNCKK LNAGQSLCVQ GIPPNCKKKI RVFRGNNSAG GCEEIAAIAE LTPPELLSIN PGLICPDSEN QSSVWSSSRE VCVARGPGSV FIEYMGASGK SISFDDMQAV VNASKAVFHV ALGFVIDYDR DGNYKNGTFS KFWNDDLTPA SAKAFKKKNP GVRLLMSLGG DSLWVNDSLT VDVDWLDPPD PEAWIDNAQA SLTGLAELYN IDGIDIDFEH FPADYSVSNS AFTFCIGTLI QKLKDNNTIG IATIAPFGSV MPQYQDLMAN FGDLIDYISF QFYAYDLPTT ADYVQTFRAT TLFFDPAKLL ASTQINGTRS ITGTQFRNAV NLLQEEDGLL GVMLYDADAS RSLNFAEEKG VLALIPGPYD GSLPAPTPPP PPLSQGRRSS DDSFQRRWLL TFSFWVAVVM YNILHT |