Mp5g20257



Description

Annotation

Database ID Description
ProSiteProfiles PS51502 Stress-response A/B barrel domain profile.
Gene3D G3DSA:3.30.70.100 -
SUPERFAMILY SSF54909 Dimeric alpha+beta barrel
Pfam PF07876 Stress responsive A/B Barrel Domain
PANTHER PTHR33178 -
SMART SM00886 Dabb_2
MapolyID Mapoly0058s0001, Mapoly0058s0001 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPKC12 Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g20257.1 chr5:25765128..25765807 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g20257 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g20257 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.