Mp5g24550



Description

Annotation

Database ID Description
Pfam PF14570 RING/Ubox like zinc-binding domain
SUPERFAMILY SSF57850 RING/U-box
PANTHER PTHR13301 X-BOX TRANSCRIPTION FACTOR-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
Pfam PF03552 Cellulose synthase
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
FunFam G3DSA:3.90.550.10:FF:000040 cellulose synthase-like protein D3
KEGG K20924 cellulose synthase-like protein [EC:2.4.1.-]
MapolyID Mapoly0010s0003 -
GO GO:0005802 trans-Golgi network
GO GO:0016760 cellulose synthase (UDP-forming) activity
GO GO:0009833 plant-type primary cell wall biogenesis
GO GO:0030244 cellulose biosynthetic process
GO GO:0005886 plasma membrane
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpCSLD8 Cell wall related protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

Cell wall related protein (from nomenclature)

0 core 1 peripheral

Kang HS, Tong X, Mariette A, Leong M, Beahan C, Flores-Sandoval E, Pedersen GB, Rautengarten C, Bowman JL, Ebert B, Bacic A, Doblin MS, Persson S, Lampugnani ER. (2025) · The Plant journal : for cell and molecular biology  research sequence subject
M. polymorpha CSLD ortholog identified as a cell wall GT candidate by phylogenetic analysis.

Transcript models

Transcript ID Location Sequences Extract region
Mp5g24550.1 chr5:31291155..31297149 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g24550 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g24550 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.