Mp6g02400
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF02519 | Auxin responsive protein |
| PANTHER | PTHR31374 | AUXIN-INDUCED PROTEIN-LIKE-RELATED |
| KEGG | K14488 | SAUR family protein |
| MapolyID | Mapoly0035s0025 | - |
| GO | GO:0009733 | response to auxin |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSAUR1 | Auxin responsive protein | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g02400 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g02400.1 GCCCATTTCT TCTTCTTCCT CCTCCTCCTC TTCTTCTTCT GCTTCGTCGT CGTCGTCGTC GGTCTGGTCC GGCCTGGTCT CCGAGCTGCA GCTGCTGCTG CTGCACTCTT TACTGCTGCC ATAAAGATGT GGGGCACTGG GCCAGATGCA ACCTGCCCGC CTGCCCCCCC GATACCCATC TATCCATCTC TCTCTCACGC ACACACACAC ACTCTCTCTC TCTCTCTCTC ATCAATCGAC CCTGCCCCCC CGCCAACCAA GCCTGCCTGC CTGCCTGCCT GCCTGCTTCT GCCTGTGGCG GTCTCTGTCT CTGTCTGTGT CCCACTCCCC CCCTCTCTAT CTGTCTGAGA ACATTTCGCC TTCCTATATA AAATTCTGTG GCTTGTGGTC AAGCATTCAG TCGATCGCCA CATCCTCAAG CGACTTCTCT CCTGTCTGTG AATATCTCAC TCTCTATCTC TCCCTCTCTC TCACACTCTG TGTCCCTCTC TCTCTCTCTC GCAGTCTATC TCCTACTCTC TCTCACTCAC TCTCGCACAC TCCTCTCTCT GCGGGTGTCT TATGTTCTCG GACTCGGAAT AGTTTTGTCG AGAGCTATCG AAGCGGGCTG CGCCAACTGG AGGAGGATCG GGCCGATTGG ACTGCGGTCG TAGAAGATTG AAGGTTCATG GTGTGTGAGA AGGGTCAGTG TAGAGAGCTT GAGTGTATGA AGGGCGTCGA TCGCAGAACT AGTCGTCGGG GATCGAAGGT CGGAGGTTTG TAGCCTTTGC GCCCGAGTGC GGATCGCGTC GTGGTGTGAA GCGGTTCGCT TCAGTCTTCT TCCCGAGGTT CAGAGACGTT TGTGCTGTCA CCATGGTGCT AGGAAAGATG CCGAGGAGCA CCTCGAAGCT AGTCAAGAGG ATACAGGGAT TGACGAGTCC GAAGAAGGCG AATTCGGAGC TGGGCCATTC CAAGAGGGTG GCGTTCTCGC AGCTGCCGGA GTCCGCGCAG TGGGCTCTGC TCACGGGCAG AGCCGGAGGC ATGTCCAAGT CGTCCAAGTT AGGCAGGCTT CCGCAGGACA TTCCGCAAGG ATGCCTGGCC GTGTACGTGG GGCTCGAGAG GAGGCGGTAC GTCATCAGCA CCAACTTCCT CGCGCACTCG CTCTTTAAAG AATTGCTCAA GCGATCGGAG GAGGAGTTCG GGTTCGAGTA CGAGGGCGGG CTCAACATTG CCTGCGACTG CTCGCTCTTC GAGAACGTGC TGTGGATGAT CGCCACCAAG GATCCCGCCG CGCGGACCAC GAAACTGGAC GAGGTCATCG ACATGCTGGA GAGCTCGTTC TGAAGCCGCT CGCCCTCCGC GCGAACTCAA CGACGGAGAC GACGAAGAGG AAGACAGTAG TCGCTTGCTT GCACTGAAGT TAGATTTTGC CCCTGCTCGC TCGTGCTGGT GCGGCGCACG CACTCTCGAC GCTGGCCGCG ACAAGATATC GCTCCGCCGC GGACCGACCG ACCATCGCGC GCAATCCCTC CTCCGTCACA TCGCTCGACG GCAAGAATGC GCGCACACAG CTCTTCACGC GCACATTGGT TCTCTTCCGC GGCGGAGCTC GGTTTCCGAC GATGGCCTTG CCTTCCGCCC CTCGAGAAGG TGCTCAAGGC CTGTGAAATT CGCCGGGCCA GCAGCTCGAG CTTCACCAGC AGCACCCCCG GAATGCAGCA GCAGACTCGA GAAAGACGAA ATCCAAGCGA GGGTGCTGAG GGAAATCCCG CCGCTGCCAA TCCCAGCGAC GTCCCGATTC CAGCACCCGT CCACTGGCGG AGAGTCAACT GCTCGCTCGC TCGCTCGATC GAGCGGGCCA CGCCCAAGCA CGCAACGGGT GCCCGAACTG CACTTACACC CCGGGAGCAG ACATTCATCG ACGTTCAGAC TTGTCTTGTT CCACAAACGG CTACAAGCGG CTTCGGATAC GAGGAGCTCG GTCGGGAATA TGTATGTCCA TAGTTTACGA CGGATCGCGC TACGAATTTA ATTAATTAAC TAGATGCGGG TTTCCGAGGG ATGTTCAGAG TCCCGTTAGA TTATTACACA GCAGCTTTAG AGCTTACGGT CTTGCCTCTT GCCAGCTTTG ATGAGAGTTT TAGAGAGAGA CAGAGAGAGA TGGAGAGGGA GAGGTGATTA GAGTATGTCT GAGAAGCACC GGCTGCTCCA ATGCGCAGAC GGTGCTCCAG CCACACCTCG GGCACGGCCT TCTTCTTGTA CAGATACGAG ACTTGTGGAG TTTCTCTCTG CGGTCTCAGT CCCCAAAATG AAAATCTTAC CAGTAACAGC TTTCAGTGTT CAAAGC |
mRNA UTR + CDS |
| >Mp6g02400.1 GCCCATTTCT TCTTCTTCCT CCTCCTCCTC TTCTTCTTCT GCTTCGTCGT CGTCGTCGTC GGTCTGGTCC GGCCTGGTCT CCGAGCTGCA GCTGCTGCTG CTGCACTCTT TACTGCTGCC ATAAAGATGT GGGGCACTGG GCCAGATGCA ACCTGCCCGC CTGCCCCCCC GATACCCATC TATCCATCTC TCTCTCACGC ACACACACAC ACTCTCTCTC TCTCTCTCTC ATCAATCGAC CCTGCCCCCC CGCCAACCAA GCCTGCCTGC CTGCCTGCCT GCCTGCTTCT GCCTGTGGCG GTCTCTGTCT CTGTCTGTGT CCCACTCCCC CCCTCTCTAT CTGTCTGAGA ACATTTCGCC TTCCTATATA AAATTCTGTG GCTTGTGGTC AAGCATTCAG TCGATCGCCA CATCCTCAAG CGACTTCTCT CCTGTCTGTG AATATCTCAC TCTCTATCTC TCCCTCTCTC TCACACTCTG TGTCCCTCTC TCTCTCTCTC GCAGTCTATC TCCTACTCTC TCTCACTCAC TCTCGCACAC TCCTCTCTCT GCGGGTGTCT TATGTTCTCG GACTCGGAAT AGTTTTGTCG AGAGCTATCG AAGCGGGCTG CGCCAACTGG AGGAGGATCG GGCCGATTGG ACTGCGGTCG TAGAAGATTG AAGGTTCATG GTGTGTGAGA AGGGTCAGTG TAGAGAGCTT GAGTGTATGA AGGGCGTCGA TCGCAGAACT AGTCGTCGGG GATCGAAGGT CGGAGGTTTG TAGCCTTTGC GCCCGAGTGC GGATCGCGTC GTGGTGTGAA GCGGTTCGCT TCAGTCTTCT TCCCGAGGTT CAGAGACGTT TGTGCTGTCA CCATGGTGCT AGGAAAGATG CCGAGGAGCA CCTCGAAGCT AGTCAAGAGG ATACAGGGAT TGACGAGTCC GAAGAAGGCG AATTCGGAGC TGGGCCATTC CAAGAGGGTG GCGTTCTCGC AGCTGCCGGA GTCCGCGCAG TGGGCTCTGC TCACGGGCAG AGCCGGAGGC ATGTCCAAGT CGTCCAAGTT AGGCAGGCTT CCGCAGGACA TTCCGCAAGG ATGCCTGGCC GTGTACGTGG GGCTCGAGAG GAGGCGGTAC GTCATCAGCA CCAACTTCCT CGCGCACTCG CTCTTTAAAG AATTGCTCAA GCGATCGGAG GAGGAGTTCG GGTTCGAGTA CGAGGGCGGG CTCAACATTG CCTGCGACTG CTCGCTCTTC GAGAACGTGC TGTGGATGAT CGCCACCAAG GATCCCGCCG CGCGGACCAC GAAACTGGAC GAGGTCATCG ACATGCTGGA GAGCTCGTTC TGAAGCCGCT CGCCCTCCGC GCGAACTCAA CGACGGAGAC GACGAAGAGG AAGACAGTAG TCGCTTGCTT GCACTGAAGT TAGATTTTGC CCCTGCTCGC TCGTGCTGGT GCGGCGCACG CACTCTCGAC GCTGGCCGCG ACAAGATATC GCTCCGCCGC GGACCGACCG ACCATCGCGC GCAATCCCTC CTCCGTCACA TCGCTCGACG GCAAGAATGC GCGCACACAG CTCTTCACGC GCACATTGGT TCTCTTCCGC GGCGGAGCTC GGTTTCCGAC GATGGCCTTG CCTTCCGCCC CTCGAGAAGG TGCTCAAGGC CTGTGAAATT CGCCGGGCCA GCAGCTCGAG CTTCACCAGC AGCACCCCCG GAATGCAGCA GCAGACTCGA GAAAGACGAA ATCCAAGCGA GGGTGCTGAG GGAAATCCCG CCGCTGCCAA TCCCAGCGAC GTCCCGATTC CAGCACCCGT CCACTGGCGG AGAGTCAACT GCTCGCTCGC TCGCTCGATC GAGCGGGCCA CGCCCAAGCA CGCAACGGGT GCCCGAACTG CACTTACACC CCGGGAGCAG ACATTCATCG ACGTTCAGAC TTGTCTTGTT CCACAAACGG CTACAAGCGG CTTCGGATAC GAGGAGCTCG GTCGGGAATA TGTATGTCCA TAGTTTACGA CGGATCGCGC TACGAATTTA ATTAATTAAC TAGATGCGGG TTTCCGAGGG ATGTTCAGAG TCCCGTTAGA TTATTACACA GCAGCTTTAG AGCTTACGGT CTTGCCTCTT GCCAGCTTTG ATGAGAGTTT TAGAGAGAGA CAGAGAGAGA TGGAGAGGGA GAGGTGATTA GAGTATGTCT GAGAAGCACC GGCTGCTCCA ATGCGCAGAC GGTGCTCCAG CCACACCTCG GGCACGGCCT TCTTCTTGTA CAGATACGAG ACTTGTGGAG TTTCTCTCTG CGGTCTCAGT CCCCAAAATG AAAATCTTAC CAGTAACAGC TTTCAGTGTT CAAAGC |
CDS |
| >Mp6g02400.1 ATGGTGCTAG GAAAGATGCC GAGGAGCACC TCGAAGCTAG TCAAGAGGAT ACAGGGATTG ACGAGTCCGA AGAAGGCGAA TTCGGAGCTG GGCCATTCCA AGAGGGTGGC GTTCTCGCAG CTGCCGGAGT CCGCGCAGTG GGCTCTGCTC ACGGGCAGAG CCGGAGGCAT GTCCAAGTCG TCCAAGTTAG GCAGGCTTCC GCAGGACATT CCGCAAGGAT GCCTGGCCGT GTACGTGGGG CTCGAGAGGA GGCGGTACGT CATCAGCACC AACTTCCTCG CGCACTCGCT CTTTAAAGAA TTGCTCAAGC GATCGGAGGA GGAGTTCGGG TTCGAGTACG AGGGCGGGCT CAACATTGCC TGCGACTGCT CGCTCTTCGA GAACGTGCTG TGGATGATCG CCACCAAGGA TCCCGCCGCG CGGACCACGA AACTGGACGA GGTCATCGAC ATGCTGGAGA GCTCGTTCTG A |
Protein |
| >Mp6g02400.1 MVLGKMPRST SKLVKRIQGL TSPKKANSEL GHSKRVAFSQ LPESAQWALL TGRAGGMSKS SKLGRLPQDI PQGCLAVYVG LERRRYVIST NFLAHSLFKE LLKRSEEEFG FEYEGGLNIA CDCSLFENVL WMIATKDPAA RTTKLDEVID MLESSF |