Mp6g03520



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.420.10 Peroxidase, domain 2
Pfam PF00141 Peroxidase
FunFam G3DSA:1.10.420.10:FF:000001 Peroxidase
PRINTS PR00461 Plant peroxidase signature
ProSiteProfiles PS50873 Plant heme peroxidase family profile.
PANTHER PTHR31517 -
Gene3D G3DSA:1.10.520.10 -
SUPERFAMILY SSF48113 Heme-dependent peroxidases
KEGG K00430 peroxidase [EC:1.11.1.7]
MapolyID Mapoly0035s0131 -
GO GO:0004601 peroxidase activity
GO GO:0020037 heme binding
GO GO:0006979 response to oxidative stress

Nomenclature

Gene symbol Product Transcript ID Status
MpPOD133 Peroxidase Published

Transcript models

Transcript ID Location Sequences Extract region
Mp6g03520.1 chr6:4606920..4609185 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g03520 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g03520 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.