Mp6g03790



Description

Annotation

Database ID Description
CDD cd14066 STKc_IRAK
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
Pfam PF00069 Protein kinase domain
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
ProSiteProfiles PS50011 Protein kinase domain profile.
SMART SM00220 serkin_6
Pfam PF00139 Legume lectin domain
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
PANTHER PTHR27007 -
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
CDD cd06899 lectin_legume_LecRK_Arcelin_ConA
FunFam G3DSA:1.10.510.10:FF:000240 Lectin-domain containing receptor kinase A4.3
Gene3D G3DSA:2.60.120.200 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases
FunFam G3DSA:3.30.200.20:FF:000168 L-type lectin-domain containing receptor kinase IX.1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0034s0139 -
GO GO:0005524 ATP binding
GO GO:0030246 carbohydrate binding
GO GO:0005886 plasma membrane
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_L-LEC26 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp6g03790.1 chr6:4911919..4915745 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g03790 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g03790 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.