Mp6g04540
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.20.1280.50 | - |
| Gene3D | G3DSA:2.120.10.80 | - |
| KOG | KOG2120 | SCF ubiquitin ligase, Skp2 component; N-term missing; C-term missing; [O] |
| KOG | KOG4441 | Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes; N-term missing; [TR] |
| PANTHER | PTHR46344 | OS02G0202900 PROTEIN |
| Pfam | PF00646 | F-box domain |
| Pfam | PF01344 | Kelch motif |
| Pfam | PF13964 | Kelch motif |
| ProSiteProfiles | PS50181 | F-box domain profile. |
| SMART | SM00256 | fbox_2 |
| SMART | SM00612 | kelc_smart |
| SUPERFAMILY | SSF117281 | Kelch motif |
| SUPERFAMILY | SSF81383 | F-box domain |
| GO | GO:0005515 | protein binding |
| MapolyID | Mapoly0034s0062 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining)
KL-downstream gene suppressed in Mpkai2a/Mpmax2 mutants; expression readout.
0 core 1 peripheral
Kameoka, H., et al. (2023)
· Current Biology research experimental background
KL-downstream gene suppressed in Mpkai2a/Mpmax2 mutants; expression readout.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g04540 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g04540.1 TCCTACAAGC AACTCCCTTC CTTTCCTTCT TCGTACACTA AATAATTCCG CATTTGTAAG ATACGACGAA CAAGCAGTTT GTTTGCTGCG TCTCAGAGCC TATATACGAC TACCATCCAA CAAGCCCTTT CCCAACCTTC GGCCGTCGAG CTTGCTTGCA ATCTCACCCT CCCTCCCTCT CTCTCTCTCT CTCTCTCAGA CATGAACTGC TGGCATGTGT TGTAGGCGAT CGTCCTCGTG TGTGCAGAGG GAGACTGGAG GGAAGGATCT CCACAGTAGA TAGTAGTCAG ACAGGTTGAA TACCACCGCC AGTCGAGTCG AGATTTAATG GTGTGAATGT CCTCAGATTG TATGCCGGAC AAGCTTCTCG TCTCTTCTCT TCTCTTCTCT TTCTGGGAAT CAGAGAATTC GAGATCAGCT CACGGGAAGC AGCAGCGCTT TCATCAGTAG TCGCAGCAGT AGCAGTAGCA GTAGTCTGAG TGGTACACGT ACGCTGACCT CGTCCAAATT GCCCTTCGTA CATTCAGAAA TGTACACGCG AGTAGAATGG CCGAAGGAGG CGCTGCAAAT CGGACTGGAG CAGTCTTGAT TCCTCCGACG ATTGTTACAG TTTCTGGAGC TTTCAGTGCA TCATCGTGCG GAGAGCTTTG CCAAGGAGGT AAGATCAGTT GTTGAGCAAG CACACGAGAA TCCCGTAGGC TATTGCGGCA TTTACTCATT TTCGTACACG CAATGCATAA GATGCTGTCA CCTGCGTTAC CGGTGTGATC GATTGTTGCA CCCATGATAC AAATTGCGCA TTCACATGAA TATGGCAACA CTCCGCCGCC GAGGCTTTGT GCGCAACTTC CATCCTTCAT GTTAAACAAA CTACAATCCC TAATTCCAGA ACTCACCAAT CGTGATCCCC ATGTTCATCC ACTTCACATG CTCCGTCCAG CCTTGACGGG CTCCCGTGAT CTTCATTCAT GTCCCCGAGC TGACAGCGTC AGTTTCGTCG CTCGAGAAAT CCTGGTTCCG TATTACATTG AGAGCGAGGA CATTGACGGC GCTAGCCCTC GGTGAGTATC GCTCTCGATA TAATAATCAA AGCATGCTTG CCGTCTGATA GGGATATCCA TCGAAATTCT GGCAGACCTG GCAAGAAATC GGCTTTTTCG GATGCCGTCG ATCCTGCGGG AGTCATCCAT CATCCGCACG GTTCTCAGTC GTGTGCCATT TGAGGGGTCT CGAAAGCTCA CAACTTTTTC CTGACGAGCA TGACGAGCAT GCCCGCGGCA GGTCGATCGA GGACACGTAG GGTTGCACAG ACGGACTGAC TCTGGGTATC TGCAGCAGCA TGTGTTGAGT CCATGGTTTC AGACTCAGCT GCGCACTAGC GTACACGAGA TATAAGATTT TGCATTGCAT CGGTCGCATA GAAGAGGAAG CAATGACGAT CGTTCTTCCT CCGTTCCTGT TGACTGACAG ATTTCTGCAC GAATTGAGCG CCCAAATGTC GGTGGGCGTG AAGGGAATGG AGCCGAAAAC GGGCATCTCG GATCTGCCGG ATGAGATTTT GCAGATCTGC TTCGCCCGAT TGCCTCTGAG GCATCTGCCC ATGGTGAGAG TGGTGTGTAC GAGGTGGCGG AATCTGGGCA GCTCGCAGTT GCTGCGCTGC CTCAGGAGAT CGCTGGGATT GACTCAGACT TGCACTTTCG TCATAAAGAA CGAGTACATA AGCGGCAGCT ATCGAGGGCT CCAAGTGAGG GACATCGATT CTCGCTCGCT TGCGACGGAT TCGATTGCAA CCCTGGACGG ACCCCAGAGA TTACAATTCG GAGCAGCCGG AGCAGACGGC CTCATCTACA TTCTGGGCGG CAGGTCACCT CTGATCTGCC GCAAGTCGAC ACTCAAGGCA TGGATCGTTT ATTCTCGAGT GGATGTCTAC GAGCCCTTGA ACAATTGCTG GTTCCAGTTG CCGCCCATGC GTCGAGCTCG CTTCGGGTTC GCGGTGGGAG CCTTCGTGAA TTCGGTGACC AGTGGCTCGA AGCTCATCGT GGCCGGTGGG TTCGACGGCG AAGGCGAGGC ACTGTCGGTG GCGGAAGTGT TCGATTTCGG GTTAGGACAT TGGACCCCGA TTCCGAGTAT GTGCAGCATG GCTGGACCTT GCACAGGGGA GGTGGTCGAG GGGAAATTCT ATGTTCAGCG GGCGAATTCC AAAGCCGATT CTTTCGAGGT TTATGATCCC TCCGTCGGCC GATGGACAAC TCACGACGCC ATGATAAACT TTTGCATGCT CACCTTCCAC ATGCCTGATC GATATGGAGC GCCCCAAACT GTCACAGTGG ATCTATGACC TGACCTCGCC CACGAGCTCC ATTTTCAGAC ACCAGGAGCT TGGCTCCAGC GAGCCCTCGA ATCGACTGAA CGAAGAAATA CTGAACAGAA AGGAGCTGGA TCCGAACTGA CCTCCTGGAA AATGGTACCA CGATATGCCG TCCCGTCCAT GGCCACGGGC TCGGTGACAA GTTGAAGCTC GAGCGAGCGT CGATCGAAAT CTGAAAATCA GATCTCTCAA GACAGACAGT CCTGAACTTT CGCATGCTCC TTGCGGGCAA TATTTCCGAT CCATCTAAAG GAGCGACTCC TGATGCAGAC GAACTTTGAA TCTGATCCAC TTTACTGGAA TAAGTCGTAA CAATCATCCA GCTTCCAGCA GTTCGGCCTC TGTCAATCGA GGGCCACCCT CTGCGTTGAT CCGTAGCTTT GGAGATTTTA TAGAATAGCT TCCCAAGTTG TGTGAATAAC AGTGTGAATC GAGCTGTAAA TGTCGGAGAG CCCTACCCTA TTTTCGGGAC ATAGATTTAA ATCCCCCATA AAACATTTCT CTTTCCACGG CTCTAGATAG AATTATAGAT AGATAGATAG ATTTAGATGT TCCGATGGGG GTTGAGAATT ACACATACTG GCTCGCAAGA ACTCGGATCA CACCTTAGAT GAGAGGAGTA GACACATTGT AGCCCACCTG TCATCAGAAG CCAGAGTTAT ATTATACTCT CGTGGCTATC CATCCCGTTT TCCACTCAGG TAGGGGCGAA CAGTGTCCAG AAAATTCTGT AAACGGATGC GGATAATTTC GATGCGAATA AACCGCTTGT CACATCGTCG AGGAAGCGAG TACATTCATT CAATCGGGCT TGTGCACCTC TGAACCATCT CACCGTCCCA TTCATGTCTA GCATTCATGA ACTCGCCTCG ATGTGTCGTA TGAAAGAGGA GGTTCCGACT C |
mRNA UTR + CDS |
| >Mp6g04540.1 TCCTACAAGC AACTCCCTTC CTTTCCTTCT TCGTACACTA AATAATTCCG CATTTGTAAG ATACGACGAA CAAGCAGTTT GTTTGCTGCG TCTCAGAGCC TATATACGAC TACCATCCAA CAAGCCCTTT CCCAACCTTC GGCCGTCGAG CTTGCTTGCA ATCTCACCCT CCCTCCCTCT CTCTCTCTCT CTCTCTCAGA CATGAACTGC TGGCATGTGT TGTAGGCGAT CGTCCTCGTG TGTGCAGAGG GAGACTGGAG GGAAGGATCT CCACAGTAGA TAGTAGTCAG ACAGGTTGAA TACCACCGCC AGTCGAGTCG AGATTTAATG GTGTGAATGT CCTCAGATTG TATGCCGGAC AAGCTTCTCG TCTCTTCTCT TCTCTTCTCT TTCTGGGAAT CAGAGAATTC GAGATCAGCT CACGGGAAGC AGCAGCGCTT TCATCAGTAG TCGCAGCAGT AGCAGTAGCA GTAGTCTGAG TGGTACACGT ACGCTGACCT CGTCCAAATT GCCCTTCGTA CATTCAGAAA TGTACACGCG AGTAGAATGG CCGAAGGAGG CGCTGCAAAT CGGACTGGAG CAGTCTTGAT TCCTCCGACG ATTGTTACAG TTTCTGGAGC TTTCAGTGCA TCATCGTGCG GAGAGCTTTG CCAAGGAGAT TTCTGCACGA ATTGAGCGCC CAAATGTCGG TGGGCGTGAA GGGAATGGAG CCGAAAACGG GCATCTCGGA TCTGCCGGAT GAGATTTTGC AGATCTGCTT CGCCCGATTG CCTCTGAGGC ATCTGCCCAT GGTGAGAGTG GTGTGTACGA GGTGGCGGAA TCTGGGCAGC TCGCAGTTGC TGCGCTGCCT CAGGAGATCG CTGGGATTGA CTCAGACTTG CACTTTCGTC ATAAAGAACG AGTACATAAG CGGCAGCTAT CGAGGGCTCC AAGTGAGGGA CATCGATTCT CGCTCGCTTG CGACGGATTC GATTGCAACC CTGGACGGAC CCCAGAGATT ACAATTCGGA GCAGCCGGAG CAGACGGCCT CATCTACATT CTGGGCGGCA GGTCACCTCT GATCTGCCGC AAGTCGACAC TCAAGGCATG GATCGTTTAT TCTCGAGTGG ATGTCTACGA GCCCTTGAAC AATTGCTGGT TCCAGTTGCC GCCCATGCGT CGAGCTCGCT TCGGGTTCGC GGTGGGAGCC TTCGTGAATT CGGTGACCAG TGGCTCGAAG CTCATCGTGG CCGGTGGGTT CGACGGCGAA GGCGAGGCAC TGTCGGTGGC GGAAGTGTTC GATTTCGGGT TAGGACATTG GACCCCGATT CCGAGTATGT GCAGCATGGC TGGACCTTGC ACAGGGGAGG TGGTCGAGGG GAAATTCTAT GTTCAGCGGG CGAATTCCAA AGCCGATTCT TTCGAGGTTT ATGATCCCTC CGTCGGCCGA TGGACAACTC ACGACGCCAT GATAAACTTT TGCATGCTCA CCTTCCACAT GCCTGATCGA TATGGAGCGC CCCAAACTGT CACAGTGGAT CTATGACCTG ACCTCGCCCA CGAGCTCCAT TTTCAGACAC CAGGAGCTTG GCTCCAGCGA GCCCTCGAAT CGACTGAACG AAGAAATACT GAACAGAAAG GAGCTGGATC CGAACTGACC TCCTGGAAAA TGGTACCACG ATATGCCGTC CCGTCCATGG CCACGGGCTC GGTGACAAGT TGAAGCTCGA GCGAGCGTCG ATCGAAATCT GAAAATCAGA TCTCTCAAGA CAGACAGTCC TGAACTTTCG CATGCTCCTT GCGGGCAATA TTTCCGATCC ATCTAAAGGA GCGACTCCTG ATGCAGACGA ACTTTGAATC TGATCCACTT TACTGGAATA AGTCGTAACA ATCATCCAGC TTCCAGCAGT TCGGCCTCTG TCAATCGAGG GCCACCCTCT GCGTTGATCC GTAGCTTTGG AGATTTTATA GAATAGCTTC CCAAGTTGTG TGAATAACAG TGTGAATCGA GCTGTAAATG TCGGAGAGCC CTACCCTATT TTCGGGACAT AGATTTAAAT CCCCCATAAA ACATTTCTCT TTCCACGGCT CTAGATAGAA TTATAGATAG ATAGATAGAT TTAGATGTTC CGATGGGGGT TGAGAATTAC ACATACTGGC TCGCAAGAAC TCGGATCACA CCTTAGATGA GAGGAGTAGA CACATTGTAG CCCACCTGTC ATCAGAAGCC AGAGTTATAT TATACTCTCG TGGCTATCCA TCCCGTTTTC CACTCAGGTA GGGGCGAACA GTGTCCAGAA AATTCTGTAA ACGGATGCGG ATAATTTCGA TGCGAATAAA CCGCTTGTCA CATCGTCGAG GAAGCGAGTA CATTCATTCA ATCGGGCTTG TGCACCTCTG AACCATCTCA CCGTCCCATT CATGTCTAGC ATTCATGAAC TCGCCTCGAT GTGTCGTATG AAAGAGGAGG TTCCGACTC |
CDS |
| >Mp6g04540.1 ATGTCGGTGG GCGTGAAGGG AATGGAGCCG AAAACGGGCA TCTCGGATCT GCCGGATGAG ATTTTGCAGA TCTGCTTCGC CCGATTGCCT CTGAGGCATC TGCCCATGGT GAGAGTGGTG TGTACGAGGT GGCGGAATCT GGGCAGCTCG CAGTTGCTGC GCTGCCTCAG GAGATCGCTG GGATTGACTC AGACTTGCAC TTTCGTCATA AAGAACGAGT ACATAAGCGG CAGCTATCGA GGGCTCCAAG TGAGGGACAT CGATTCTCGC TCGCTTGCGA CGGATTCGAT TGCAACCCTG GACGGACCCC AGAGATTACA ATTCGGAGCA GCCGGAGCAG ACGGCCTCAT CTACATTCTG GGCGGCAGGT CACCTCTGAT CTGCCGCAAG TCGACACTCA AGGCATGGAT CGTTTATTCT CGAGTGGATG TCTACGAGCC CTTGAACAAT TGCTGGTTCC AGTTGCCGCC CATGCGTCGA GCTCGCTTCG GGTTCGCGGT GGGAGCCTTC GTGAATTCGG TGACCAGTGG CTCGAAGCTC ATCGTGGCCG GTGGGTTCGA CGGCGAAGGC GAGGCACTGT CGGTGGCGGA AGTGTTCGAT TTCGGGTTAG GACATTGGAC CCCGATTCCG AGTATGTGCA GCATGGCTGG ACCTTGCACA GGGGAGGTGG TCGAGGGGAA ATTCTATGTT CAGCGGGCGA ATTCCAAAGC CGATTCTTTC GAGGTTTATG ATCCCTCCGT CGGCCGATGG ACAACTCACG ACGCCATGAT AAACTTTTGC ATGCTCACCT TCCACATGCC TGATCGATAT GGAGCGCCCC AAACTGTCAC AGTGGATCTA TGA |
Protein |
| >Mp6g04540.1 MSVGVKGMEP KTGISDLPDE ILQICFARLP LRHLPMVRVV CTRWRNLGSS QLLRCLRRSL GLTQTCTFVI KNEYISGSYR GLQVRDIDSR SLATDSIATL DGPQRLQFGA AGADGLIYIL GGRSPLICRK STLKAWIVYS RVDVYEPLNN CWFQLPPMRR ARFGFAVGAF VNSVTSGSKL IVAGGFDGEG EALSVAEVFD FGLGHWTPIP SMCSMAGPCT GEVVEGKFYV QRANSKADSF EVYDPSVGRW TTHDAMINFC MLTFHMPDRY GAPQTVTVDL |