Mp6g04750



Description

Annotation

Database ID Description
PANTHER PTHR22572 SUGAR-1-PHOSPHATE GUANYL TRANSFERASE
CDD cd06425 M1P_guanylylT_B_like_N
Pfam PF00483 Nucleotidyl transferase
FunFam G3DSA:3.90.550.10:FF:000013 mannose-1-phosphate guanyltransferase beta
Gene3D G3DSA:2.160.10.10 Hexapeptide repeat proteins
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases
KEGG K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
KOG KOG1322 GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase; [M]
MapolyID Mapoly0034s0043 -
GO GO:0005525 GTP binding
GO GO:0004475 mannose-1-phosphate guanylyltransferase (GTP) activity
GO GO:0009298 GDP-mannose biosynthetic process
GO GO:0016779 nucleotidyltransferase activity
GO GO:0009058 biosynthetic process
GO GO:0005737 cytoplasm
GO GO:0006486 protein glycosylation

Nomenclature

Gene symbol Product Transcript ID Status
MpGMP Provisional

Associated Literature (AI-based literature mining, Beta-version)

GDP-mannose pyrophosphorylase (GMP/VTC1); ascorbate pathway.

1 core 0 peripheral

Ishida, T., et al. (2024) · The Plant Journal  research experimental subject
GDP-mannose pyrophosphorylase (GMP/VTC1); ascorbate pathway.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g04750.1 chr6:6027599..6032444 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g04750.2 chr6:6027614..6032018 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g04750 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g04750 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.