Mp6g06120



Description

Annotation

Database ID Description
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00490 helicmild6
SMART SM00487 ultradead3
Gene3D G3DSA:3.40.50.10810 -
CDD cd18004 DEXHc_RAD54
FunFam G3DSA:3.40.50.10810:FF:000020 DNA repair and recombination protein RAD54B
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Pfam PF00176 SNF2-related domain
Pfam PF00271 Helicase conserved C-terminal domain
PANTHER PTHR45629 SNF2/RAD54 FAMILY MEMBER
Gene3D G3DSA:3.40.50.300 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:1.20.120.850 -
CDD cd18793 SF2_C_SNF
KEGG K10877 DNA repair and recombination protein RAD54B [EC:5.6.2.-]
KOG KOG0390 DNA repair protein, SNF2 family; N-term missing; [L]
MapolyID Mapoly0097s0032 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRAD54 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g06120.1 chr6:7439059..7447545 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.