Mp6g08650



Description

Annotation

Database ID Description
ProSiteProfiles PS51679 C-5 cytosine-specific DNA methylase (Dnmt) domain profile.
PIRSF PIRSF037404 DNMT1
SMART SM00439 BAH_4
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00145 C-5 cytosine-specific DNA methylase
Gene3D G3DSA:3.90.120.10 DNA Methylase, subunit A, domain 2
SUPERFAMILY SSF54160 Chromo domain-like
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
Pfam PF00385 Chromo (CHRromatin Organisation MOdifier) domain
ProSiteProfiles PS51038 BAH domain profile.
SMART SM00298 chromo_7
PANTHER PTHR10629 CYTOSINE-SPECIFIC METHYLTRANSFERASE
ProSiteProfiles PS50013 Chromo and chromo shadow domain profile.
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
FunFam G3DSA:3.90.120.10:FF:000003 DNA (cytosine-5)-methyltransferase 1
Pfam PF01426 BAH domain
Gene3D G3DSA:2.30.30.490 -
PRINTS PR00105 Cytosine-specific DNA methyltransferase signature
KEGG K00558 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
KOG KOG1911 Heterochromatin-associated protein HP1 and related CHROMO domain proteins; N-term missing; C-term missing; [B]
MapolyID Mapoly0060s0056 -
GO GO:0008168 methyltransferase activity
GO GO:0003886 DNA (cytosine-5-)-methyltransferase activity
GO GO:0005634 nucleus
GO GO:0010424 obsolete DNA methylation on cytosine within a CG sequence
GO GO:0090116 obsolete C-5 methylation of cytosine
GO GO:0010216 obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation
GO GO:0003677 DNA binding
GO GO:0003682 chromatin binding

Nomenclature

Gene symbol Product Transcript ID Status
MpCMTa CHROMOMETHYLASE, DNA (cytosine-5-)-methyltransferase Published

Associated Literature (AI-based literature mining, Beta-version)

Plant-specific CHROMOMETHYLASE family protein associated with de novo methylation in CHG/CHH contexts. Expression was analyzed across developmental stages, showing elevated expression in antheridiophores; reported as slightly more closely related to PpCMT.

1 core 2 peripheral

Schmid, M. W., et al. (2018) · Genome Biology  research experimental subject
Plant-specific CHROMOMETHYLASE family protein associated with de novo methylation in CHG/CHH contexts. Expression was analyzed across developmental stages, showing elevated expression in antheridiophores; reported as slightly more closely related to PpCMT.
Aguilar-Cruz, A., et al. (2019) · New Phytologist  research citation background
Review: chromomethylase CMTa (CHG/CHH context).
Walker, J., et al. (2025) · Cell 188: doi: 10.1016/j.cell.2025.1003.1014  research sequence comparator
Chromomethylase; 5mC methyltransferase.

Transcript models

Transcript ID Location Sequences Extract region
Mp6g08650.1 chr6:11291387..11305499 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g08650.2 chr6:11290832..11305500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp6g08650 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp6g08650 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.