Mp6g09830



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.1520.10 Ribonuclease III domain
SUPERFAMILY SSF69065 RNase III domain-like
SUPERFAMILY SSF54768 dsRNA-binding domain-like
ProSitePatterns PS00517 Ribonuclease III family signature.
SMART SM00535 riboneu5
PANTHER PTHR14950 DICER-RELATED
ProSiteProfiles PS50821 PAZ domain profile.
ProSiteProfiles PS50142 Ribonuclease III family domain profile.
FunFam G3DSA:1.10.1520.10:FF:000004 Endoribonuclease dicer-like 1
Pfam PF00636 Ribonuclease III domain
CDD cd00593 RIBOc
Pfam PF02170 PAZ domain
Gene3D G3DSA:2.170.260.10 paz domain
SMART SM00949 PAZ_2_a_3
KEGG K11592 endoribonuclease Dicer [EC:3.1.26.-]
KOG KOG0701 dsRNA-specific nuclease Dicer and related ribonucleases; N-term missing; [A]
MapolyID Mapoly0016s0027 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDCL3 miRNA biogenesis protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g09830.1 chr6:12880687..12889706 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g09830.2 chr6:12881370..12889694 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.