Mp6g13210
Description
Annotation
| Database | ID | Description |
|---|---|---|
| CDD | cd03419 | GRX_GRXh_1_2_like |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin |
| KEGG | K03676 | glutaredoxin 3 |
| KOG | KOG1752 | Glutaredoxin and related proteins; [O] |
| NCBIfam | TIGR02189 | glutaredoxin-like family |
| PANTHER | PTHR10168 | GLUTAREDOXIN |
| Pfam | PF00462 | Glutaredoxin |
| ProSiteProfiles | PS51354 | Glutaredoxin domain profile. |
| SUPERFAMILY | SSF52833 | Thioredoxin-like |
| MapolyID | Mapoly0059s0028 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpROXY2 | glutaredoxin (GRX) | Published |
CC-type GRX
Associated Literature (AI-based literature mining)
Functionally studied ROXY glutaredoxin: partially complemented Arabidopsis roxy1-2 petals and interacted (more weakly than MpROXY1) with MpTGA/PAN by Y2H, BiFC and FRET-FLIM, giving an incomplete redox-dependent supershift on the as-1-like motif by EMSA. Overexpression caused cysteine-dependent growth defects and in situ mRNA overlapped MpTGA in thallus tips and gemmae.
1 core 0 peripheral
Gutsche, N., et al. (2017)
· Plant Direct research experimental subject
Functionally studied ROXY glutaredoxin: partially complemented Arabidopsis roxy1-2 petals and interacted (more weakly than MpROXY1) with MpTGA/PAN by Y2H, BiFC and FRET-FLIM, giving an incomplete redox-dependent supershift on the as-1-like motif by EMSA. Overexpression caused cysteine-dependent growth defects and in situ mRNA overlapped MpTGA in thallus tips and gemmae.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g13210 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g13210.1 ACTGCATGGC CATGAATACG TATAGCCCTC ATCATCAACA TATGACATAG ATGGCTGAGA ACGATGAGCG CCTTGTCTTC GGTTGCACGC TTTAGGGTTT GGACTTTGGC CCTCGACACT GTCTACTGCT GTCCACCGCC TTCCTCGCTC GCTCCGTCGC TCCCTCCTTC CGGGAAGAAG AAAACCCGGC ACCCTGTGCC TGCCTGCCTG CAGTAAGTGA AGTGAGTGCA AAAGGCAAGG CAAGGCAAGG GCAAGGGCAA GGCAAGGCAA GTCCAAGCGC AGCAGCAGCA GCTGGGTACG TTTGCTCCTC CTCCTCCTCC TGCTGCTGAT CATCGCCATA ATATTGTACA CGACCGGCCC CAGTCGAGTC TGATCTGGTC TGGTCTGGTC CGGTTCTCCC ATCCGGCTGT CTTTCCTTGC AAGCTTGCTT GCTTCTGCTT CTGCTTCTGC TTCATATAAG TATTCGAGGC AAGATGCAGG AACACTGACT GACCTGTGAG AGTGGACGAT ACGCTACTAG GCCAGCCAGC AGCAGCAGCA GCAGGCAGGC AGGCAGGCAC GCAGCAGCAG CAGCCGCAGC CTCACAACAC TGGTCCAATA ACGATGAGCA GAAGCAGCAC AAATACTCTA GCAAAGTGGA ATGAGGTTTG GGGGACAGAT CTGTGAACAG GAGGAGGAGG CTGCGGAGGA GGACTACTTT GTCGCTAGTT TATCCAGAGT GTTCGGGGGA TGTGGATGTG GACGTCGTCG TGAAGAAGAA CGGGATCATG GCGTTCTACC TCGCTGCTGC TGTAGGAAGC AGTGCAACCA CGTATCGTTA GCACACCAGT CTACATTGCG CTAGTAGAGA GCGACCAGGC AGGTATTGCT ACGCGATCTG TTAGTCCGAG TCCTCTGGAG GCCGATAGAC ATACATGTCT AGACGCCCTC TCCTTCCTCC GAGTTCAGAC TGACAGCACC CACACACGGC TCTCGCTCTC TCTTTCTCTT TCTCTCACTC TCTCGCTGTT CGGTGCAAGA CTAGAAATTT CTAGGACTCT GTGACATTCT TCTGTGAGTT TCATCTCGTC ATCCTCTGCG ACTCGCCTCA TCTCACATCA CCTCAGCTCC CTTCGCTCTC TCTCCCCGAA GTCCACTTGT CTCACCATCA ATTTGCCGTG TATTGCAGTC GAGCCCACGG TGCTGCTCTG CCGTCGACCT CTTCTCTTCT GCTCGTCGGC TCGGCGAACT TCGTGTGCTC TGTTGTTGTG CTGATTTTGC CCTGACCCTG ACCGGTTGCG GCTGCACAGG CACCATCGCC GGCAGCGCCA TCGTCTAGCC GTGGGTCTCG AGGCCGGTGT CCAGCCATCT ATCAGCATTC CGGAGCTCAT CGAGGCCTTG GCGCAAACGC AGATCCAACC ACGTAATTAG GCGCCGCCGT GTCTGAGCAC GACGAGTCTT GCAGCCAACC TGACATGGAA CTTGACCCCG CGACTAACAG CGCCAAGATC GTCGAGCCCT CGCAGCAATT GGACCTGTGA CTGCGAAGAG CGCGAGCGTG CAGGACCCGG CCCACCTCCT CGCTTGCTGC AGGCCCAGCG CGCGGATCCG GCCAAATTGC TCGAGTCCAG CGGCAGCTCG GAACCCAATT GAGCGGCTTC TCTCGCAGCG CAGCTGAGCC AAAATGCAGA GCCCGCACCC GCAATCGCTC CAGTGGGGAG CGCAGCTGAG CGCGACGGCG AGCCAAGTGC CCGATCAAAT CACGAGGCAG CTGATGCCGC CGCCCGCAGC CATCTCGTTC AGCGATGCCG CCGCCGGCAA GGGGGCCAGC GCTTACCCGA CCAAGAATGG CGCCGTGTAC ACCGAGCCCG TAGTGGCCCG GCACGTAGGC ACGTACAACA CCGCCGAGGT GTGGGATAGC CTGGAGAGAG TGGCGTCCGA GAACGCCGTG GTCATGTTCA GCATCAGCTC GTGCTGCGTG TGCCATGTGG TGAAGCGGCT GTTCAGTAGT CTGGGCGTCG CGCCGGCCAT TTACGAACTA GATCAGGAGA GCTCGGGGCC TGAGATCGTC GTAGCTCTGC AAAGATTGGC CGGCGCCTCG CAGGCGCTGC CGGCAATTTT CATCGGCAAG AAGTACATTG GTGGATTAGA GGAGCTCATC TCAGCGCACA TCGGAGGATT TCTCGTCCCC CAGTTGAAAC AAGCCGGCGC TCTCTGGCTA TAGATCCTGC AGACAATTCT CTTGCTCATC ACTTCACTTC ACTTCACTGC TCAGCTCAGC GTAGCTCGCT TCGGATATGT TCGCCTATGT TCGGCTCGGC TCGATTCGGT TCCTTGCAGG TCCGCTCAGT TCAGTTCGGT TCGGTTCAGT TCAGTTCAGT TCGTTCAGCA GAAACCTCGG AGAGCGAATG AATCATGGGT CAGCGGCCAT TCTGCGCAGT CACGACCTTC CCGTAACCTG TAACCCAACG ATCTTCTCAT GCACTCGTGA CGGTACCGGT GTTGCAAGCA GTCCCAGCAG GAGCGATGGA TGGATGGCAT ATTAGGTGTA AGATTGGTAG CTAGCAGCAA TCGTCGAGAA GGTTCTAGTG TGATTGATAC TCTCGCTGCC TTCCTTTATA TCAGCCCCGT ATGTAGCTTA TGTCCTCCCC GTAGGCGGTG GGTGCCCTTG GAATCAGTTT CAAAGGATCA GTAGAACGAG AGATGGATGG ATGGATAGAT AGATAGATAG ATAGATAGTT AGCTAGCAAG CTAGAAAGAT GTTAGAGGGA GAGAAGGAGC GTGCACTGAT CGGGGACGTG GCTCGAGTCG GAGATTGCAG GGATGATGAT CTCACATCAT CAGGACGACT GTCCTCTTCT TCTGTGAGCG CTATCCCATA TTATCATCAG AACGACTTTT CTCTTCTTCT GTGAGCGAGT GTCTGGATCT GGCTGGTGGT GGAAGAAGTC CCCCACCCTC AGCCCCCCAC TATCGTATCT AAGACCGCGC TTCTGTACCA GCTGCAAAAT TGTACCCCCT GAACATTTTT TAATCGGGCG AATCGATCCC CTTGTTC |
mRNA UTR + CDS |
| >Mp6g13210.1 ACTGCATGGC CATGAATACG TATAGCCCTC ATCATCAACA TATGACATAG ATGGCTGAGA ACGATGAGCG CCTTGTCTTC GGTTGCACGC TTTAGGGTTT GGACTTTGGC CCTCGACACT GTCTACTGCT GTCCACCGCC TTCCTCGCTC GCTCCGTCGC TCCCTCCTTC CGGGAAGAAG AAAACCCGGC ACCCTGTGCC TGCCTGCCTG CAGTAAGTGA AGTGAGTGCA AAAGGCAAGG CAAGGCAAGG GCAAGGGCAA GGCAAGGCAA GTCCAAGCGC AGCAGCAGCA GCTGGGCCAG CCAGCAGCAG CAGCAGCAGG CAGGCAGGCA GGCACGCAGC AGCAGCAGCC GCAGCCTCAC AACACTGGTC CAATAACGAT GAGCAGAAGC AGCACAAATA CTCTAGCAAA GTGGAATGAG GTTTGGGGGA CAGATCTGTG AACAGGAGGA GGAGGCTGCG GAGGAGGACT ACTTTGTCGC TAGTTTATCC AGAGTGTTCG GGGGATGTGG ATGTGGACGT CGTCGTGAAG AAGAACGGGA TCATGGCGTT CTACCTCGCT GCTGCTGTAG GAAGCAGTGC AACCACGTAT CGTTAGCACA CCAGTCTACA TTGCGCTAGT AGAGAGCGAC CAGGCAGTCG AGCCCACGGT GCTGCTCTGC CGTCGACCTC TTCTCTTCTG CTCGTCGGCT CGGCGAACTT CGTGTGCTCT GTTGTTGTGC TGATTTTGCC CTGACCCTGA CCGGTTGCGG CTGCACAGGC ACCATCGCCG GCAGCGCCAT CGTCTAGCCG TGGGTCTCGA GGCCGGTGTC CAGCCATCTA TCAGCATTCC GGAGCTCATC GAGGCCTTGG CGCAAACGCA GATCCAACCA CGTAATTAGG CGCCGCCGTG TCTGAGCACG ACGAGTCTTG CAGCCAACCT GACATGGAAC TTGACCCCGC GACTAACAGC GCCAAGATCG TCGAGCCCTC GCAGCAATTG GACCTGTGAC TGCGAAGAGC GCGAGCGTGC AGGACCCGGC CCACCTCCTC GCTTGCTGCA GGCCCAGCGC GCGGATCCGG CCAAATTGCT CGAGTCCAGC GGCAGCTCGG AACCCAATTG AGCGGCTTCT CTCGCAGCGC AGCTGAGCCA AAATGCAGAG CCCGCACCCG CAATCGCTCC AGTGGGGAGC GCAGCTGAGC GCGACGGCGA GCCAAGTGCC CGATCAAATC ACGAGGCAGC TGATGCCGCC GCCCGCAGCC ATCTCGTTCA GCGATGCCGC CGCCGGCAAG GGGGCCAGCG CTTACCCGAC CAAGAATGGC GCCGTGTACA CCGAGCCCGT AGTGGCCCGG CACGTAGGCA CGTACAACAC CGCCGAGGTG TGGGATAGCC TGGAGAGAGT GGCGTCCGAG AACGCCGTGG TCATGTTCAG CATCAGCTCG TGCTGCGTGT GCCATGTGGT GAAGCGGCTG TTCAGTAGTC TGGGCGTCGC GCCGGCCATT TACGAACTAG ATCAGGAGAG CTCGGGGCCT GAGATCGTCG TAGCTCTGCA AAGATTGGCC GGCGCCTCGC AGGCGCTGCC GGCAATTTTC ATCGGCAAGA AGTACATTGG TGGATTAGAG GAGCTCATCT CAGCGCACAT CGGAGGATTT CTCGTCCCCC AGTTGAAACA AGCCGGCGCT CTCTGGCTAT AGATCCTGCA GACAATTCTC TTGCTCATCA CTTCACTTCA CTTCACTGCT CAGCTCAGCG TAGCTCGCTT CGGATATGTT CGCCTATGTT CGGCTCGGCT CGATTCGGTT CCTTGCAGGT CCGCTCAGTT CAGTTCGGTT CGGTTCAGTT CAGTTCAGTT CGTTCAGCAG AAACCTCGGA GAGCGAATGA ATCATGGGTC AGCGGCCATT CTGCGCAGTC ACGACCTTCC CGTAACCTGT AACCCAACGA TCTTCTCATG CACTCGTGAC GGTACCGGTG TTGCAAGCAG TCCCAGCAGG AGCGATGGAT GGATGGCATA TTAGGTGTAA GATTGGTAGC TAGCAGCAAT CGTCGAGAAG GTTCTAGTGT GATTGATACT CTCGCTGCCT TCCTTTATAT CAGCCCCGTA TGTAGCTTAT GTCCTCCCCG TAGGCGGTGG GTGCCCTTGG AATCAGTTTC AAAGGATCAG TAGAACGAGA GATGGATGGA TGGATAGATA GATAGATAGA TAGATAGTTA GCTAGCAAGC TAGAAAGATG TTAGAGGGAG AGAAGGAGCG TGCACTGATC GGGGACGTGG CTCGAGTCGG AGATTGCAGG GATGATGATC TCACATCATC AGGACGACTG TCCTCTTCTT CTGTGAGCGC TATCCCATAT TATCATCAGA ACGACTTTTC TCTTCTTCTG TGAGCGAGTG TCTGGATCTG GCTGGTGGTG GAAGAAGTCC CCCACCCTCA GCCCCCCACT ATCGTATCTA AGACCGCGCT TCTGTACCAG CTGCAAAATT GTACCCCCTG AACATTTTTT AATCGGGCGA ATCGATCCCC TTGTTC |
CDS |
| >Mp6g13210.1 ATGCAGAGCC CGCACCCGCA ATCGCTCCAG TGGGGAGCGC AGCTGAGCGC GACGGCGAGC CAAGTGCCCG ATCAAATCAC GAGGCAGCTG ATGCCGCCGC CCGCAGCCAT CTCGTTCAGC GATGCCGCCG CCGGCAAGGG GGCCAGCGCT TACCCGACCA AGAATGGCGC CGTGTACACC GAGCCCGTAG TGGCCCGGCA CGTAGGCACG TACAACACCG CCGAGGTGTG GGATAGCCTG GAGAGAGTGG CGTCCGAGAA CGCCGTGGTC ATGTTCAGCA TCAGCTCGTG CTGCGTGTGC CATGTGGTGA AGCGGCTGTT CAGTAGTCTG GGCGTCGCGC CGGCCATTTA CGAACTAGAT CAGGAGAGCT CGGGGCCTGA GATCGTCGTA GCTCTGCAAA GATTGGCCGG CGCCTCGCAG GCGCTGCCGG CAATTTTCAT CGGCAAGAAG TACATTGGTG GATTAGAGGA GCTCATCTCA GCGCACATCG GAGGATTTCT CGTCCCCCAG TTGAAACAAG CCGGCGCTCT CTGGCTATAG |
Protein |
| >Mp6g13210.1 MQSPHPQSLQ WGAQLSATAS QVPDQITRQL MPPPAAISFS DAAAGKGASA YPTKNGAVYT EPVVARHVGT YNTAEVWDSL ERVASENAVV MFSISSCCVC HVVKRLFSSL GVAPAIYELD QESSGPEIVV ALQRLAGASQ ALPAIFIGKK YIGGLEELIS AHIGGFLVPQ LKQAGALWL |