Mp6g16560
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
| SUPERFAMILY | SSF51182 | RmlC-like cupins |
| Pfam | PF00190 | Cupin |
| PRINTS | PR00325 | Germin signature |
| PANTHER | PTHR31238 | GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 |
| SMART | SM00835 | Cupin_1_3 |
| CDD | cd02241 | cupin_OxOx |
| MapolyID | Mapoly0170s0021 | - |
| GO | GO:0030145 | manganese ion binding |
| GO | GO:0005618 | cell wall |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPR15i | Pathogen related | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp6g16560 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp6g16560.1 ATGAATCTCC TTGCTGCTAT GATCCTTGCA GCTGGACTGC TGTCAGCTGT CCACATTGTC CATGCAGCGG ATCCTGACCC ACTGCAGGAT TTCTGCATTG CAGACCTTGC TGCCGGACCA GTTTCAAATG GTTTCGCTTG CAAGTTGCTT GCACTTGCTT CCACAGACTA CTTTGCATTT TCTGGGCTTG CGGAAGCTGC GAATCCCAGC GTATCTGCTA CCAACGACAC TGCAAACCTC GCCTTCGTCA GACAATGGCC AGCTCTGAAC ACTCAGGGAT TGTCTCTCAT AAGACTCGAT ATCAATCCTG GTGGCATCAT CTTTCCCCAT ACACACAACT TGGCCACTGA GATTCTGTAT GTGTTGGAGG GAGAGATGTA TACGGGCTTC GTCACCAACA ACTTCGGCAA CGACCCAACC ATATCTAACA AGCTGTATGC AAAGGTCGTG AAGAAGGAAG AAGCTTTCAT TTTTCCCAAA GGTCTGCTAC ACTTCCAGCT GAACAAGGGG AAGGTGCTTG CATCGAGTCT AAACGTCCTA AACAGTCAGA ATCCTGGTAT TCAGCTCATG CCTTCAGCTT TGTTTGGAAA TGGCATCGAA CGTGAAATGC TGGAAAAGTC ATTCTTCATG AATGAGACTC AAGTTGCTGC ACATAACTCA TGTTGGATAA CCACATTTAT CTTACTCCTG CTCTGGCTTC ATCGTCCGTT CGCATAA |
mRNA UTR + CDS |
| >Mp6g16560.1 ATGAATCTCC TTGCTGCTAT GATCCTTGCA GCTGGACTGC TGTCAGCTGT CCACATTGTC CATGCAGCGG ATCCTGACCC ACTGCAGGAT TTCTGCATTG CAGACCTTGC TGCCGGACCA GTTTCAAATG GTTTCGCTTG CAAGTTGCTT GCACTTGCTT CCACAGACTA CTTTGCATTT TCTGGGCTTG CGGAAGCTGC GAATCCCAGC GTATCTGCTA CCAACGACAC TGCAAACCTC GCCTTCGTCA GACAATGGCC AGCTCTGAAC ACTCAGGGAT TGTCTCTCAT AAGACTCGAT ATCAATCCTG GTGGCATCAT CTTTCCCCAT ACACACAACT TGGCCACTGA GATTCTGTAT GTGTTGGAGG GAGAGATGTA TACGGGCTTC GTCACCAACA ACTTCGGCAA CGACCCAACC ATATCTAACA AGCTGTATGC AAAGGTCGTG AAGAAGGAAG AAGCTTTCAT TTTTCCCAAA GGTCTGCTAC ACTTCCAGCT GAACAAGGGG AAGGTGCTTG CATCGAGTCT AAACGTCCTA AACAGTCAGA ATCCTGGTAT TCAGCTCATG CCTTCAGCTT TGTTTGGAAA TGGCATCGAA CGTGAAATGC TGGAAAAGTC ATTCTTCATG AATGAGACTC AAGTTGCTGC ACATAACTCA TGTTGGATAA CCACATTTAT CTTACTCCTG CTCTGGCTTC ATCGTCCGTT CGCATAA |
CDS |
| >Mp6g16560.1 ATGAATCTCC TTGCTGCTAT GATCCTTGCA GCTGGACTGC TGTCAGCTGT CCACATTGTC CATGCAGCGG ATCCTGACCC ACTGCAGGAT TTCTGCATTG CAGACCTTGC TGCCGGACCA GTTTCAAATG GTTTCGCTTG CAAGTTGCTT GCACTTGCTT CCACAGACTA CTTTGCATTT TCTGGGCTTG CGGAAGCTGC GAATCCCAGC GTATCTGCTA CCAACGACAC TGCAAACCTC GCCTTCGTCA GACAATGGCC AGCTCTGAAC ACTCAGGGAT TGTCTCTCAT AAGACTCGAT ATCAATCCTG GTGGCATCAT CTTTCCCCAT ACACACAACT TGGCCACTGA GATTCTGTAT GTGTTGGAGG GAGAGATGTA TACGGGCTTC GTCACCAACA ACTTCGGCAA CGACCCAACC ATATCTAACA AGCTGTATGC AAAGGTCGTG AAGAAGGAAG AAGCTTTCAT TTTTCCCAAA GGTCTGCTAC ACTTCCAGCT GAACAAGGGG AAGGTGCTTG CATCGAGTCT AAACGTCCTA AACAGTCAGA ATCCTGGTAT TCAGCTCATG CCTTCAGCTT TGTTTGGAAA TGGCATCGAA CGTGAAATGC TGGAAAAGTC ATTCTTCATG AATGAGACTC AAGTTGCTGC ACATAACTCA TGTTGGATAA CCACATTTAT CTTACTCCTG CTCTGGCTTC ATCGTCCGTT CGCATAA |
Protein |
| >Mp6g16560.1 MNLLAAMILA AGLLSAVHIV HAADPDPLQD FCIADLAAGP VSNGFACKLL ALASTDYFAF SGLAEAANPS VSATNDTANL AFVRQWPALN TQGLSLIRLD INPGGIIFPH THNLATEILY VLEGEMYTGF VTNNFGNDPT ISNKLYAKVV KKEEAFIFPK GLLHFQLNKG KVLASSLNVL NSQNPGIQLM PSALFGNGIE REMLEKSFFM NETQVAAHNS CWITTFILLL LWLHRPFA |