Mp6g18180



Description

Annotation

Database ID Description
KEGG K00558 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
KOG KOG0919 C-5 cytosine-specific DNA methylase; C-term missing; [K]
Gene3D G3DSA:2.30.30.490 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00145 C-5 cytosine-specific DNA methylase
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
ProSiteProfiles PS51679 C-5 cytosine-specific DNA methylase (Dnmt) domain profile.
ProSiteProfiles PS51038 BAH domain profile.
PANTHER PTHR10629 CYTOSINE-SPECIFIC METHYLTRANSFERASE
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
Pfam PF01426 BAH domain
Pfam PF12047 Cytosine specific DNA methyltransferase replication foci domain
CDD cd04708 BAH_plantDCM_II
ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature.
Gene3D G3DSA:3.90.120.20 -
PANTHER PTHR10629:SF53 DNA (CYTOSINE-5)-METHYLTRANSFERASE 1B
SMART SM00439 BAH_4
PIRSF PIRSF037404 DNMT1
ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site.
TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase
PRINTS PR00105 Cytosine-specific DNA methyltransferase signature
MapolyID Mapoly0038s0027 -

Nomenclature

Gene symbol Product Transcript ID Status
MpMET DNA methyltransferase Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g18180.1 chr6:20270547..20281226 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g18180.2 chr6:20269397..20281226 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g18180.3 chr6:20269558..20280865 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.