Mp7g03500
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF54495 | UBC-like |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. |
| PANTHER | PTHR24068 | UBIQUITIN-CONJUGATING ENZYME E2 |
| FunFam | G3DSA:3.10.110.10:FF:000003 | Ubiquitin-conjugating enzyme E2 E3 |
| CDD | cd00195 | UBCc |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. |
| SMART | SM00212 | ubc_7 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme |
| KEGG | K20217 | ubiquitin-conjugating enzyme E2 E [EC:2.3.2.23] |
| KOG | KOG0417 | Ubiquitin-protein ligase; [O] |
| MapolyID | Mapoly0074s0046 | - |
| GO | GO:0061631 | ubiquitin conjugating enzyme activity |
| GO | GO:0005634 | nucleus |
| GO | GO:0000209 | protein polyubiquitination |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCOP10 | A subunit of CDD complex | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g03500 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g03500.1 AGGAGGAGGA CAGAGCGGGA GGGAGCGAGG GAGGGATGGA GGGAGGGAGA TCGGGCTCCT CTACAGAATT ACTTGTACCG AGCAAGCGAG CTGCGGTCTC GTCACGGACG CGCTCACATC TTCTCCAGTG AGCACATTTA TAGGTCGACC TGTCTGGAAT TATTGCGCAG AGGCGGGGAG GAGGAGGAGG AGGGGAGGAC GGGGCCGGGT CAGGTGGTGT TGGAGTGTCG AGCAGGTCGG AAGAGAGAAG GAGGAGAAAG TTCTGTCAGG TGGGGCGATT CGGTCTTCGG TGAGGTTGAA GTTCTCTTTC TGGTTCCATG ATCGATTCAA AGGGTAGGCA GTGCAAGAAG ACTGAAGAGC AGGCCTCGGG TACCGAGCGG AAGCACGATA TTTGATTCAA GACAGGCAGA GAGCTTCATC GGACTGGAGT GAGGCGGGGT ATTGGAGGGG AGAGGTGTGA GGAAGGGAGA AGACAATAGA AATGAGTGCC AGTGCGGCGG CGAGTAGTGG GGTTGGGGGT CGGGCTTGGT CGTCCAACGC ATCTCTCAAT ACATCGGCCA AGCGTATCCA GAAAGAGTTG GCCGAGATTT CCCTGGACCC GCCGTCAAAT TGCTCTGCTG GTCCCAAAGG CGATAACCTC TATGAATGGG TCTCTACTAT TATGGGCCCT GCAGGTGTGG CATCCTGATT CTGTTTCTCT TCTTCTTGAC ATCTGCGTGG TTCCATTCTA CATATTTGCA ATCAGTTAGG TCATCATCAA TATCCATCTT TCGCACATAC TCCATTTGTT TTCAGTAGCA CACGCCTAAG GCGATGCTTG TTTTCCCCTC TTCTTTAAGA GGACTCGCCT GAAGGTGATC TTGGCCTTTT TTTATTGACT GCGTGGAAAA AAGAATTAAG TAACTTACCA GAAAAAGATC ACCATTCACC TTGATACTGT TCCGTCACCT CAGTTGGCAC TATCAGCCAA CTATGTCGTT TTCAGTTTTC AGCACTTGAA TTGAATCGCC TCGGATACGC ATGAAATCGT TGTTGCGTTA ATAACTAAAT ATCATGTAAT GTTCAAGATA TTGAGACATA GTTTCACCAC TAGCTGTTGT CCCCGGTGCT TCGTCAGTGT TTAGATGCTG TTTCAGTTAC TCCTGTGTGT ATTCAACGAT GCCATCTTTA AGGGGAAGAG GTAGATCAGA CCTAGAGTCA TCTTCTGTTT ATTTGGATCT TTGCGGGCAT TTCGTAGTAT GGAAGTGATG TATACCCTCG TAGAGGAATG GCGTGTCTAA CAGACTCTAG CTTTGGTCCG GGATTGAAAC TTATCTTCGC AAGAATATAC ACCTATTATT CGATACCCCA GATAGTTAAC TCTCTCATGT AAGTTTAAAA TATATATTGA AGTAATGCAT TAATTTCTTT ACATACGATC GAATTTTAGT GGGACTGTTG TCTAGAAGCT TTGTCGTTGC CTTTACGTAA GTCATTTTAA GGATAAACTT GGTGATTTTC TGTTCTGTCC AAGAAAATCT GGTGATCGTG ACTATACAGA GGCTGTTTTG GCCGAAAGCG GATGGTGGAT AATCTGTCAT CCATGGGATT GAACTCTTTT TTGCAGGATC GCCATACCAG GGTGGTGTCT TTTTCCTAGA TATCAATTTT CCTGTCGATT ATCCATTCAA ACCTCCAAAG GTAAAGTACC AGGGCCATGC CAATTATGTT GGAGATGCAG GAGAAATTGG ACTCATCCAA CGTAATTTTA ATGTGTAGTT TCTTTTGATG TTTTTGTTAT ATAATTGTGT TGAGGATTCA AAGTGCTGAG GGTTGATCAT GTTTGGATCA GGTGATGTTC AGAACAAGAA TCTATCACTG TAACATCAAC ACCAGCGGGC AGATATGTTT AGACATTCTT AAAGACAACT GGAGTCCTGC GCTCACGATT TCCAAGGTCC TTTTGTCCAT CTGCTCACTC TTGACAGATG CCAATCCTCG TAAGTGCTTC ATTTTAAACC TTATGTGATG TTTAATGACA AGGAAATTCA AAGGGAGATG ATTTGAAGTG AATATGCCAT GGACAACACC GATGAGTGAG TGTTCCAGTT ACAGTAAATC AAATGAGACT GAAGCCTGAT CTTTTTATTT AGACTAGCTC GGACCGTAAG GAGGTAACAT CGTCTGCAAG TTTGAGTCGG TACTGAGTTC ATTCAACAGA AAGCTTTCTA AGAATCATAC TTCTGAGAAA TAATGGAATC CACTAGTCTT GTACATTATT GTTGATATGT TCTATTTGAA TGTTTTCAGT ATTGGGGCTT TTAAATTACC GAATCCATGT GTATCTGACA AGTGAACTCT TGTTACAGAT GACCCTTTGG TCGGCAGCAT TGCACAACAG TATTTGACAG ACCGCACAGC CCATGACAAG ACAGCTGCCG AGTGGACCAG AAGATATGCA CAATAGTCTG CAGCTAGGTC AAGGTTTGGT TTTAAAAGCT AAAGAATGGT AAGTTCGACT TTTTTAGGAA TTATGTATAG AACATTTTTG AGGATTGACA TGTTGTTGAG TTCCTCCAAA CATTGTTACC AACAACAAGT GGTCAGTTGT TGATTGCTGT CGCTCTTTGA TGCTGTGTAC ACATATAAAT TACTAGACAA AATTCAGATG AGCTGTGGAG GTCATTTCTT TTTTGTTTGT GTGCTGGCCT GCTGGCCCGT TTGGTTTGTG CATTGTTGCC AGTGAAAATA AAAACCCGCC TTCTCACGTG AGCGAAGTCG AAATTCTGTG CGCACACCGA CTCATCTCAT GCTTTCCATT GTGAAAGCAT GGTGTGTGCT GTCGATTCAA GCATTTTTAT ATATCAATTT ATATAGAAGC AGCTGAGCCC GACGTCAGGT AACCTTCTTT ATGTAATTGT GCTGGAGAAG CAAGAACTGC AAGCTCAGAA GATTATCTCA AGGTGAGAAG TGAAAGTCAC GATTTCTGAC TGTATAAGCT GCTGGAGTAA CGGTCCCTTA GCGGAACTTT TATTTTCTAC GTTTTGAGG |
mRNA UTR + CDS |
| >Mp7g03500.1 AGGAGGAGGA CAGAGCGGGA GGGAGCGAGG GAGGGATGGA GGGAGGGAGA TCGGGCTCCT CTACAGAATT ACTTGTACCG AGCAAGCGAG CTGCGGTCTC GTCACGGACG CGCTCACATC TTCTCCAGTG AGCACATTTA TAGGTCGACC TGTCTGGAAT TATTGCGCAG AGGCGGGGAG GAGGAGGAGG AGGGGAGGAC GGGGCCGGGT CAGGTGGTGT TGGAGTGTCG AGCAGGTCGG AAGAGAGAAG GAGGAGAAAG TTCTGTCAGG TGGGGCGATT CGGTCTTCGG TGAGGTTGAA GTTCTCTTTC TGGTTCCATG ATCGATTCAA AGGGTAGGCA GTGCAAGAAG ACTGAAGAGC AGGCCTCGGG TACCGAGCGG AAGCACGATA TTTGATTCAA GACAGGCAGA GAGCTTCATC GGACTGGAGT GAGGCGGGGT ATTGGAGGGG AGAGGTGTGA GGAAGGGAGA AGACAATAGA AATGAGTGCC AGTGCGGCGG CGAGTAGTGG GGTTGGGGGT CGGGCTTGGT CGTCCAACGC ATCTCTCAAT ACATCGGCCA AGCGTATCCA GAAAGAGTTG GCCGAGATTT CCCTGGACCC GCCGTCAAAT TGCTCTGCTG GTCCCAAAGG CGATAACCTC TATGAATGGG TCTCTACTAT TATGGGCCCT GCAGGATCGC CATACCAGGG TGGTGTCTTT TTCCTAGATA TCAATTTTCC TGTCGATTAT CCATTCAAAC CTCCAAAGGT GATGTTCAGA ACAAGAATCT ATCACTGTAA CATCAACACC AGCGGGCAGA TATGTTTAGA CATTCTTAAA GACAACTGGA GTCCTGCGCT CACGATTTCC AAGGTCCTTT TGTCCATCTG CTCACTCTTG ACAGATGCCA ATCCTCATGA CCCTTTGGTC GGCAGCATTG CACAACAGTA TTTGACAGAC CGCACAGCCC ATGACAAGAC AGCTGCCGAG TGGACCAGAA GATATGCACA ATAGTCTGCA GCTAGGTCAA GGTTTGGTTT TAAAAGCTAA AGAATGGTAA GTTCGACTTT TTTAGGAATT ATGTATAGAA CATTTTTGAG GATTGACATG TTGTTGAGTT CCTCCAAACA TTGTTACCAA CAACAAGTGG TCAGTTGTTG ATTGCTGTCG CTCTTTGATG CTGTGTACAC ATATAAATTA CTAGACAAAA TTCAGATGAG CTGTGGAGGT CATTTCTTTT TTGTTTGTGT GCTGGCCTGC TGGCCCGTTT GGTTTGTGCA TTGTTGCCAG TGAAAATAAA AACCCGCCTT CTCACGTGAG CGAAGTCGAA ATTCTGTGCG CACACCGACT CATCTCATGC TTTCCATTGT GAAAGCATGG TGTGTGCTGT CGATTCAAGC ATTTTTATAT ATCAATTTAT ATAGAAGCAG CTGAGCCCGA CGTCAGGTAA CCTTCTTTAT GTAATTGTGC TGGAGAAGCA AGAACTGCAA GCTCAGAAGA TTATCTCAAG GTGAGAAGTG AAAGTCACGA TTTCTGACTG TATAAGCTGC TGGAGTAACG GTCCCTTAGC GGAACTTTTA TTTTCTACGT TTTGAGG |
CDS |
| >Mp7g03500.1 ATGAGTGCCA GTGCGGCGGC GAGTAGTGGG GTTGGGGGTC GGGCTTGGTC GTCCAACGCA TCTCTCAATA CATCGGCCAA GCGTATCCAG AAAGAGTTGG CCGAGATTTC CCTGGACCCG CCGTCAAATT GCTCTGCTGG TCCCAAAGGC GATAACCTCT ATGAATGGGT CTCTACTATT ATGGGCCCTG CAGGATCGCC ATACCAGGGT GGTGTCTTTT TCCTAGATAT CAATTTTCCT GTCGATTATC CATTCAAACC TCCAAAGGTG ATGTTCAGAA CAAGAATCTA TCACTGTAAC ATCAACACCA GCGGGCAGAT ATGTTTAGAC ATTCTTAAAG ACAACTGGAG TCCTGCGCTC ACGATTTCCA AGGTCCTTTT GTCCATCTGC TCACTCTTGA CAGATGCCAA TCCTCATGAC CCTTTGGTCG GCAGCATTGC ACAACAGTAT TTGACAGACC GCACAGCCCA TGACAAGACA GCTGCCGAGT GGACCAGAAG ATATGCACAA TAG |
Protein |
| >Mp7g03500.1 MSASAAASSG VGGRAWSSNA SLNTSAKRIQ KELAEISLDP PSNCSAGPKG DNLYEWVSTI MGPAGSPYQG GVFFLDINFP VDYPFKPPKV MFRTRIYHCN INTSGQICLD ILKDNWSPAL TISKVLLSIC SLLTDANPHD PLVGSIAQQY LTDRTAHDKT AAEWTRRYAQ |