Mp7g06280



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47430 GB|AAC33480.1
ProSiteProfiles PS50090 Myb-like domain profile.
Pfam PF00249 Myb-like DNA-binding domain
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
CDD cd00167 SANT
SMART SM00717 sant
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
KOG KOG0051 RNA polymerase I termination factor, Myb superfamily; N-term missing; [K]
MapolyID Mapoly0057s0043 -

Nomenclature

Gene symbol Product Transcript ID Status
MpMYBL3 transcription factor, MYB-related Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp7g06280.1 chr7:8803585..8809541 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g06280 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g06280 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.