Mp7g11720



Description

Annotation

Database ID Description
ProSiteProfiles PS50142 Ribonuclease III family domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00487 ultradead3
Gene3D G3DSA:1.10.1520.10 Ribonuclease III domain
Pfam PF14709 double strand RNA binding domain from DEAD END PROTEIN 1
Gene3D G3DSA:3.40.50.300 -
Pfam PF00636 Ribonuclease III domain
Gene3D G3DSA:3.30.160.380 Dicer dimerisation domain
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SMART SM00490 helicmild6
PANTHER PTHR14950 DICER-RELATED
SMART SM00358 DRBM_3
CDD cd18034 DEXHc_dicer
CDD cd19869 DSRM_DCL_plant
FunFam G3DSA:3.30.160.380:FF:000001 Endoribonuclease dicer-like 1
Pfam PF02170 PAZ domain
CDD cd00593 RIBOc
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SMART SM00949 PAZ_2_a_3
SMART SM00535 riboneu5
SUPERFAMILY SSF54768 dsRNA-binding domain-like
SUPERFAMILY SSF69065 RNase III domain-like
Pfam PF03368 Dicer dimerisation domain
FunFam G3DSA:1.10.1520.10:FF:000004 Endoribonuclease dicer-like 1
Gene3D G3DSA:3.30.160.20 -
FunFam G3DSA:3.40.50.300:FF:000705 Endoribonuclease dicer-like protein
SUPERFAMILY SSF101690 PAZ domain
ProSiteProfiles PS51327 Dicer double-stranded RNA-binding fold domain profile.
ProSiteProfiles PS50821 PAZ domain profile.
Pfam PF00271 Helicase conserved C-terminal domain
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:2.170.260.10 paz domain
Pfam PF04851 Type III restriction enzyme, res subunit
ProSitePatterns PS00517 Ribonuclease III family signature.
KEGG K11592 endoribonuclease Dicer [EC:3.1.26.-]
KOG KOG0701 dsRNA-specific nuclease Dicer and related ribonucleases; [A]
MapolyID Mapoly0003s0184 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDCL4 miRNA biogenesis protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g11720.1 chr7:14940682..14970037 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.