Mp7g13190



Description

Annotation

Database ID Description
KEGG K08486 syntaxin 1B/2/3
KOG KOG0810 SNARE protein Syntaxin 1 and related proteins; [U]
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF05739 SNARE domain
Coils Coil Coil
SUPERFAMILY SSF47661 t-snare proteins
PANTHER PTHR19957:SF277 SYNTAXIN OF PLANTS 122 PROTEIN
ProSitePatterns PS00914 Syntaxin / epimorphin family signature.
SMART SM00397 tSNARE_6
Gene3D G3DSA:1.20.5.110 -
CDD cd00179 SynN
SMART SM00503 SynN_4
PANTHER PTHR19957 SYNTAXIN
CDD cd15848 SNARE_syntaxin1-like
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
Gene3D G3DSA:1.20.58.70 -
Pfam PF00804 Syntaxin
MapolyID Mapoly0009s0005 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP13A Ortholog of Arabidopsis SYP13 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g13190.1 chr7:14746674..14751760 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.