Mp7g13800
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.40.480.10 | - |
| PANTHER | PTHR21495 | NUCLEOPORIN-RELATED |
| Pfam | PF03018 | Dirigent-like protein |
| MapolyID | Mapoly0009s0065 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpDIR3 | Secondary metabolism enzyme | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Secondary metabolism enzyme (from nomenclature)
0 core 1 peripheral
Kobayashi, H., et al. (2023)
· Frontiers in Plant Science research sequence background
Locus ID for MpSGF16B, listed in the candidate peptide gene table.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g13800 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g13800.1 ATCCATGTCT TCCTCGTTGC ATTGGGTTTC CTTTCTGTTG TGGGGTTCAG AATGTACGAT GACTATTATG ACGGTGACCT TTGATTGCAG GGGCAGGAGT CCGTCTGAAG TCCTGTGGAA CAAATCTCGA GAACATGGTC CTGGAAATCG CGACGCTGGA TTCGTCAATC TTTCGGACCC GCAGTCTGCG TCCGGTCGTC GTGGTCACTT TTTAGGCGAC GTTTCTCATT CCAGGTGATC GTGGTCGATC TCGGAGAGGC AGAGTGAGCT CAATCGGGCT CGCACTGGAG TTGACAGACA GGCCGAAGTC GAAGTCTACG ATTGTTCCCT GGAGCTACGC TCATCCGGAG CTGCGAAATT CCATTGACCG GTGTTGAAGG AAGCGGAAAT GGTGCCTCTG AGATGGGGAG CAGTGGCGGC ACTTGTGCTG CTGGTGTCGA TCTCCGTGGT GAAGGCCAGC GATCCGAATG GAGAGGTAGA GTCGATGACT TACTTTGTGC ACTGCACGGA TGAAGTCAAT ATCGTCGCAG GGCCCGGCAA GGATGGTCGA GATCTGACCA AGTTGGCATT TGGGAGCACT TTGGTGTTCG ACAATGATGT GACCGTAGGA CCTGAACGGG ACTCGAAGCT CGTGGGCAGA AGGCAGGGAA TGGCTGTCAT GGACAACTTC GCCGGGACGA ATTATTACCT TCTGTTTACC GTCATTTTTG AACATCACGA GAAATACCAG GGATCGCTGC AAGTGCAAGG AACGGAGATT GGCAGTGGAG CTCGAGAAAT CACAGTCGTC GGAGGTACAG GAGACTTCAG AGGTGCTCGC GGCTACTCCA CCTTCCACTT GTATACCAGT GATCCCTACC CCATCATCCA ACAGGACTTC GTCATTTACA AGAGCAGCTT CAACTACAAA CCGTCTGCTG ACAGCTCAGA CATGTAAGTT AGACGAGAAT CTCCGACAGT CCTAGAGAAT CGATATCGAA GGAGTCAATC TTCTGTCGCG CCGCTTCTGA TGAATGCAGT GAAGTTTTTG TTGGATATGG ACCCCGTTAT CTTTTCGTGC CTCCGTTAAA TCAGTCGAGC GTTTGCTCTT CTAGTCACTT GAGTCACACC TGCACGAAGT AATACACGGT TTTCATGACT GCACCAAATA AGGAATAGAG ATGTACTTGC TGGCTTCCAG TCTTACCGTA AACGAAGCTT CTAAGATGTG ACTTTCCCTT CCTGTGAGTA GAACAAAGAC TCTGATCATG TTTCGTGCCG GATGTTTTGT TTCGTCTGGA GTCTTTCGAC TATATCTGCC TACAGAATCT AAATGCATAT CATCGATATT TTCGGGTCCT GGACGCTTGT GAGATAGTGA ACCTTTAGAG AAAAGCATCG AGTAAGTCTT CTGCATCGAG GGGAGAACAT GCATCATTTA GAGGCATGTC TGTCGTGTAG CTCATTAGTT GAAACGAAGA GAAAGAATGA TTCTCCTGAT CATGTATCTG TCGAGATTGG TATTTGGGGC AGTAGGAATG AAAGTTCTCC AGGAGTTTTA GAGGCATGTC TCACGTTTAG CTCATTCGTT TAGTTGAAGA AACATTACGT TTCTCCTGCT CCTGTATCTT TTGAGATTGG TAGTTGGGTC ACCAGGAATG AAAGTTTAAC AGAGTGTATC TCCAAGCAGG AAGATAGATC CTTTTTTCTC CTGTTGTGTA TGATGCCCTT TGAAATCAAA TTCTCGCTGG TTTTCAGGTT T |
mRNA UTR + CDS |
| >Mp7g13800.1 ATCCATGTCT TCCTCGTTGC ATTGGGTTTC CTTTCTGTTG TGGGGTTCAG AATGTACGAT GACTATTATG ACGGTGACCT TTGATTGCAG GGGCAGGAGT CCGTCTGAAG TCCTGTGGAA CAAATCTCGA GAACATGGTC CTGGAAATCG CGACGCTGGA TTCGTCAATC TTTCGGACCC GCAGTCTGCG TCCGGTCGTC GTGGTCACTT TTTAGGCGAC GTTTCTCATT CCAGGTGATC GTGGTCGATC TCGGAGAGGC AGAGTGAGCT CAATCGGGCT CGCACTGGAG TTGACAGACA GGCCGAAGTC GAAGTCTACG ATTGTTCCCT GGAGCTACGC TCATCCGGAG CTGCGAAATT CCATTGACCG GTGTTGAAGG AAGCGGAAAT GGTGCCTCTG AGATGGGGAG CAGTGGCGGC ACTTGTGCTG CTGGTGTCGA TCTCCGTGGT GAAGGCCAGC GATCCGAATG GAGAGGTAGA GTCGATGACT TACTTTGTGC ACTGCACGGA TGAAGTCAAT ATCGTCGCAG GGCCCGGCAA GGATGGTCGA GATCTGACCA AGTTGGCATT TGGGAGCACT TTGGTGTTCG ACAATGATGT GACCGTAGGA CCTGAACGGG ACTCGAAGCT CGTGGGCAGA AGGCAGGGAA TGGCTGTCAT GGACAACTTC GCCGGGACGA ATTATTACCT TCTGTTTACC GTCATTTTTG AACATCACGA GAAATACCAG GGATCGCTGC AAGTGCAAGG AACGGAGATT GGCAGTGGAG CTCGAGAAAT CACAGTCGTC GGAGGTACAG GAGACTTCAG AGGTGCTCGC GGCTACTCCA CCTTCCACTT GTATACCAGT GATCCCTACC CCATCATCCA ACAGGACTTC GTCATTTACA AGAGCAGCTT CAACTACAAA CCGTCTGCTG ACAGCTCAGA CATGTAAGTT AGACGAGAAT CTCCGACAGT CCTAGAGAAT CGATATCGAA GGAGTCAATC TTCTGTCGCG CCGCTTCTGA TGAATGCAGT GAAGTTTTTG TTGGATATGG ACCCCGTTAT CTTTTCGTGC CTCCGTTAAA TCAGTCGAGC GTTTGCTCTT CTAGTCACTT GAGTCACACC TGCACGAAGT AATACACGGT TTTCATGACT GCACCAAATA AGGAATAGAG ATGTACTTGC TGGCTTCCAG TCTTACCGTA AACGAAGCTT CTAAGATGTG ACTTTCCCTT CCTGTGAGTA GAACAAAGAC TCTGATCATG TTTCGTGCCG GATGTTTTGT TTCGTCTGGA GTCTTTCGAC TATATCTGCC TACAGAATCT AAATGCATAT CATCGATATT TTCGGGTCCT GGACGCTTGT GAGATAGTGA ACCTTTAGAG AAAAGCATCG AGTAAGTCTT CTGCATCGAG GGGAGAACAT GCATCATTTA GAGGCATGTC TGTCGTGTAG CTCATTAGTT GAAACGAAGA GAAAGAATGA TTCTCCTGAT CATGTATCTG TCGAGATTGG TATTTGGGGC AGTAGGAATG AAAGTTCTCC AGGAGTTTTA GAGGCATGTC TCACGTTTAG CTCATTCGTT TAGTTGAAGA AACATTACGT TTCTCCTGCT CCTGTATCTT TTGAGATTGG TAGTTGGGTC ACCAGGAATG AAAGTTTAAC AGAGTGTATC TCCAAGCAGG AAGATAGATC CTTTTTTCTC CTGTTGTGTA TGATGCCCTT TGAAATCAAA TTCTCGCTGG TTTTCAGGTT T |
CDS |
| >Mp7g13800.1 ATGGTGCCTC TGAGATGGGG AGCAGTGGCG GCACTTGTGC TGCTGGTGTC GATCTCCGTG GTGAAGGCCA GCGATCCGAA TGGAGAGGTA GAGTCGATGA CTTACTTTGT GCACTGCACG GATGAAGTCA ATATCGTCGC AGGGCCCGGC AAGGATGGTC GAGATCTGAC CAAGTTGGCA TTTGGGAGCA CTTTGGTGTT CGACAATGAT GTGACCGTAG GACCTGAACG GGACTCGAAG CTCGTGGGCA GAAGGCAGGG AATGGCTGTC ATGGACAACT TCGCCGGGAC GAATTATTAC CTTCTGTTTA CCGTCATTTT TGAACATCAC GAGAAATACC AGGGATCGCT GCAAGTGCAA GGAACGGAGA TTGGCAGTGG AGCTCGAGAA ATCACAGTCG TCGGAGGTAC AGGAGACTTC AGAGGTGCTC GCGGCTACTC CACCTTCCAC TTGTATACCA GTGATCCCTA CCCCATCATC CAACAGGACT TCGTCATTTA CAAGAGCAGC TTCAACTACA AACCGTCTGC TGACAGCTCA GACATGTAA |
Protein |
| >Mp7g13800.1 MVPLRWGAVA ALVLLVSISV VKASDPNGEV ESMTYFVHCT DEVNIVAGPG KDGRDLTKLA FGSTLVFDND VTVGPERDSK LVGRRQGMAV MDNFAGTNYY LLFTVIFEHH EKYQGSLQVQ GTEIGSGARE ITVVGGTGDF RGARGYSTFH LYTSDPYPII QQDFVIYKSS FNYKPSADSS DM |