Mp7g15800
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF00285 | Citrate synthase, C-terminal domain |
| FunFam | G3DSA:1.10.580.10:FF:000005 | Citrate synthase |
| Gene3D | G3DSA:1.10.230.10 | - |
| FunFam | G3DSA:1.10.230.10:FF:000002 | Citrate synthase |
| ProSitePatterns | PS00480 | Citrate synthase signature. |
| PANTHER | PTHR11739 | CITRATE SYNTHASE |
| Gene3D | G3DSA:1.10.580.10 | Citrate Synthase, domain 1 |
| SUPERFAMILY | SSF48256 | Citrate synthase |
| PRINTS | PR00143 | Citrate synthase signature |
| PIRSF | PIRSF001369 | Citrate_synth |
| KEGG | K01647 | citrate synthase [EC:2.3.3.1] |
| KOG | KOG2617 | Citrate synthase; [C] |
| MapolyID | Mapoly0111s0039 | - |
| GO | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer |
| GO | GO:0005759 | mitochondrial matrix |
| GO | GO:0006099 | tricarboxylic acid cycle |
| GO | GO:0005975 | carbohydrate metabolic process |
| GO | GO:0004108 | citrate (Si)-synthase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCIS5 | organic acid biosynthesis and exudation | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
organic acid biosynthesis and exudation (from nomenclature)
0 core 1 peripheral
Rico-Reséndiz, F., et al. (2020)
· International Journal of Molecular Sciences research experimental background
Citrate synthase family member with variable expression in the transcriptome.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g15800 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g15800.1 AAGGGAAGAA GAAGGAGAAG ACGAGAGAAG GAGGATCGAG GAGCAGAGCA GTGGCGCCCA TGGCCTCGAC GACGAGGCTC GCGATGCTGT CGCGGCATTT TGCGGTGCAC GACGATGAAT GTGGGGCGAC CGATGGCGAG GGCAAGTTGA AGGTGGTCGA TGGGAGGACG GGAAAGGAGT ACGAGCTGGA AATTGGCGCC TCGAGGACTG TGAGGGCGAC GGATTTGAAG AAGATCGGGG TTAGACTGTA CGATCCGGGG TACGCGAACA CAGCGGCCGT GAGGTCGGCA ATTTCGTACA TCGATGGGGA TCGAGGGATT TTGCGCTACC GAGGGTACCC GATCGAAGAG CTGGCAGAGA GGAGTAGCTT TGAAGAAGTG AGTTATTTGC TCGTGTATGG AGAATTGCCG ACGAGCGCGC AGCTGGCGAG GTGGGAGTTG GCTGTGTCGC AGCACTCTGC GGTGCCCGAG GGCGTGCTGA AGATCATTGC GTCGCTGCCT CACGATGCGC ACCCCATGGG CATGCTCATG GTCGGGATCT GTACGCTCTC CTCTTTCCAT AACGATTCCA ATCCGGCCTT GCGCGGGCAC GATTTGTACG GGTCGGCTTC TGTTCGAGAC AAGCAGATGG TGCGACTGCT CGGCAAGGTG CCGACGATTG CTGCGGCCGT GTATCAGCGG ATGGCGGGCA GGGCGCCCGT CGCGCCTCGC TGCGGGCTGT CGTACGCGGA GAATTTTCTC TACATGCTCG ATTCTCTGGG CGACAGGAGC TACCGGCCCA ACCCTCGCCT CGCGAGAGCG ATGGACATTC TCTTCGTCTT GCACGCTGAG CACGAGATGA ACTGTTCGAC TGCTGCCGCT CGGCATTTGG CCTCGAGCGG GGTCGATGTC TACACGGCGA TGGCGGGCGC GACGGGAGCC CTCTATGGAC CTCTGCACGG GGGCGCCAAC GAGGCGGTGT TGAAAATGTT GAGTGAGATC GGGACGGTGC AGAGCATTCC GGAGTTTCTC GAGGGTGTCA AGAGCAGGAA ACGCAAGATG TCAGGATTCG GGCACCGTGT GTACAAGAAC TATGATCCTC GGGCGAAGAT CATCAGAGGG CTTGCTGACG AGGTGTTTTC GATTGTGGGA CGCGACCCTC TCATCGAGGT TGCGGTCGCT CTGGAACAAG CAGCACTCTC CGACGAGTAC TTCGTCAGCC GCAAGCTGTA CCCGAATGTG GACTTTTACT CGGGATTGAT CTACCGAGCG CTGGGCTTCC CCACCGAATT CTTCCCGGTT CTGTTTGCCA TTCCGCGCAT GGCTGGCTAC TTAGCACACT GGAAGGAGTC GCTGGCGGAC CCCGACACAA AGATCATGCG ACCCCAGCAG TGGTACACGG GGGAAGGGCT TCGCTCTTAC TCGAATGCTC ACGCTCGTAC AGCCACACAC GAGGCAGAAG AGCTTGCTCA GATTCCCCAT TCAAATGCCT ACAGACGGCG ATTGGCTGGA GTCAATGCGG GGAAGTGCAG TTAAGACGGT TTTGCACAAG TGTACAGATG GTTGATGTGA CGAATCACAA GATGTGAGAC CCTTTCAAAA CTCCCAACTA GAAAGCAACG GAAATTATCC AAACCCCAGA GTCCCACTGC GAGAGACCAG AAATTCTGGA ACATGTGAAT TTACAAAAAT TATGTATAAA TGAGTAATAT ATTACATTCG GAATCAAACA ACTATTGCAG |
mRNA UTR + CDS |
| >Mp7g15800.1 AAGGGAAGAA GAAGGAGAAG ACGAGAGAAG GAGGATCGAG GAGCAGAGCA GTGGCGCCCA TGGCCTCGAC GACGAGGCTC GCGATGCTGT CGCGGCATTT TGCGGTGCAC GACGATGAAT GTGGGGCGAC CGATGGCGAG GGCAAGTTGA AGGTGGTCGA TGGGAGGACG GGAAAGGAGT ACGAGCTGGA AATTGGCGCC TCGAGGACTG TGAGGGCGAC GGATTTGAAG AAGATCGGGG TTAGACTGTA CGATCCGGGG TACGCGAACA CAGCGGCCGT GAGGTCGGCA ATTTCGTACA TCGATGGGGA TCGAGGGATT TTGCGCTACC GAGGGTACCC GATCGAAGAG CTGGCAGAGA GGAGTAGCTT TGAAGAAGTG AGTTATTTGC TCGTGTATGG AGAATTGCCG ACGAGCGCGC AGCTGGCGAG GTGGGAGTTG GCTGTGTCGC AGCACTCTGC GGTGCCCGAG GGCGTGCTGA AGATCATTGC GTCGCTGCCT CACGATGCGC ACCCCATGGG CATGCTCATG GTCGGGATCT GTACGCTCTC CTCTTTCCAT AACGATTCCA ATCCGGCCTT GCGCGGGCAC GATTTGTACG GGTCGGCTTC TGTTCGAGAC AAGCAGATGG TGCGACTGCT CGGCAAGGTG CCGACGATTG CTGCGGCCGT GTATCAGCGG ATGGCGGGCA GGGCGCCCGT CGCGCCTCGC TGCGGGCTGT CGTACGCGGA GAATTTTCTC TACATGCTCG ATTCTCTGGG CGACAGGAGC TACCGGCCCA ACCCTCGCCT CGCGAGAGCG ATGGACATTC TCTTCGTCTT GCACGCTGAG CACGAGATGA ACTGTTCGAC TGCTGCCGCT CGGCATTTGG CCTCGAGCGG GGTCGATGTC TACACGGCGA TGGCGGGCGC GACGGGAGCC CTCTATGGAC CTCTGCACGG GGGCGCCAAC GAGGCGGTGT TGAAAATGTT GAGTGAGATC GGGACGGTGC AGAGCATTCC GGAGTTTCTC GAGGGTGTCA AGAGCAGGAA ACGCAAGATG TCAGGATTCG GGCACCGTGT GTACAAGAAC TATGATCCTC GGGCGAAGAT CATCAGAGGG CTTGCTGACG AGGTGTTTTC GATTGTGGGA CGCGACCCTC TCATCGAGGT TGCGGTCGCT CTGGAACAAG CAGCACTCTC CGACGAGTAC TTCGTCAGCC GCAAGCTGTA CCCGAATGTG GACTTTTACT CGGGATTGAT CTACCGAGCG CTGGGCTTCC CCACCGAATT CTTCCCGGTT CTGTTTGCCA TTCCGCGCAT GGCTGGCTAC TTAGCACACT GGAAGGAGTC GCTGGCGGAC CCCGACACAA AGATCATGCG ACCCCAGCAG TGGTACACGG GGGAAGGGCT TCGCTCTTAC TCGAATGCTC ACGCTCGTAC AGCCACACAC GAGGCAGAAG AGCTTGCTCA GATTCCCCAT TCAAATGCCT ACAGACGGCG ATTGGCTGGA GTCAATGCGG GGAAGTGCAG TTAAGACGGT TTTGCACAAG TGTACAGATG GTTGATGTGA CGAATCACAA GATGTGAGAC CCTTTCAAAA CTCCCAACTA GAAAGCAACG GAAATTATCC AAACCCCAGA GTCCCACTGC GAGAGACCAG AAATTCTGGA ACATGTGAAT TTACAAAAAT TATGTATAAA TGAGTAATAT ATTACATTCG GAATCAAACA ACTATTGCAG |
CDS |
| >Mp7g15800.1 ATGGCCTCGA CGACGAGGCT CGCGATGCTG TCGCGGCATT TTGCGGTGCA CGACGATGAA TGTGGGGCGA CCGATGGCGA GGGCAAGTTG AAGGTGGTCG ATGGGAGGAC GGGAAAGGAG TACGAGCTGG AAATTGGCGC CTCGAGGACT GTGAGGGCGA CGGATTTGAA GAAGATCGGG GTTAGACTGT ACGATCCGGG GTACGCGAAC ACAGCGGCCG TGAGGTCGGC AATTTCGTAC ATCGATGGGG ATCGAGGGAT TTTGCGCTAC CGAGGGTACC CGATCGAAGA GCTGGCAGAG AGGAGTAGCT TTGAAGAAGT GAGTTATTTG CTCGTGTATG GAGAATTGCC GACGAGCGCG CAGCTGGCGA GGTGGGAGTT GGCTGTGTCG CAGCACTCTG CGGTGCCCGA GGGCGTGCTG AAGATCATTG CGTCGCTGCC TCACGATGCG CACCCCATGG GCATGCTCAT GGTCGGGATC TGTACGCTCT CCTCTTTCCA TAACGATTCC AATCCGGCCT TGCGCGGGCA CGATTTGTAC GGGTCGGCTT CTGTTCGAGA CAAGCAGATG GTGCGACTGC TCGGCAAGGT GCCGACGATT GCTGCGGCCG TGTATCAGCG GATGGCGGGC AGGGCGCCCG TCGCGCCTCG CTGCGGGCTG TCGTACGCGG AGAATTTTCT CTACATGCTC GATTCTCTGG GCGACAGGAG CTACCGGCCC AACCCTCGCC TCGCGAGAGC GATGGACATT CTCTTCGTCT TGCACGCTGA GCACGAGATG AACTGTTCGA CTGCTGCCGC TCGGCATTTG GCCTCGAGCG GGGTCGATGT CTACACGGCG ATGGCGGGCG CGACGGGAGC CCTCTATGGA CCTCTGCACG GGGGCGCCAA CGAGGCGGTG TTGAAAATGT TGAGTGAGAT CGGGACGGTG CAGAGCATTC CGGAGTTTCT CGAGGGTGTC AAGAGCAGGA AACGCAAGAT GTCAGGATTC GGGCACCGTG TGTACAAGAA CTATGATCCT CGGGCGAAGA TCATCAGAGG GCTTGCTGAC GAGGTGTTTT CGATTGTGGG ACGCGACCCT CTCATCGAGG TTGCGGTCGC TCTGGAACAA GCAGCACTCT CCGACGAGTA CTTCGTCAGC CGCAAGCTGT ACCCGAATGT GGACTTTTAC TCGGGATTGA TCTACCGAGC GCTGGGCTTC CCCACCGAAT TCTTCCCGGT TCTGTTTGCC ATTCCGCGCA TGGCTGGCTA CTTAGCACAC TGGAAGGAGT CGCTGGCGGA CCCCGACACA AAGATCATGC GACCCCAGCA GTGGTACACG GGGGAAGGGC TTCGCTCTTA CTCGAATGCT CACGCTCGTA CAGCCACACA CGAGGCAGAA GAGCTTGCTC AGATTCCCCA TTCAAATGCC TACAGACGGC GATTGGCTGG AGTCAATGCG GGGAAGTGCA GTTAA |
Protein |
| >Mp7g15800.1 MASTTRLAML SRHFAVHDDE CGATDGEGKL KVVDGRTGKE YELEIGASRT VRATDLKKIG VRLYDPGYAN TAAVRSAISY IDGDRGILRY RGYPIEELAE RSSFEEVSYL LVYGELPTSA QLARWELAVS QHSAVPEGVL KIIASLPHDA HPMGMLMVGI CTLSSFHNDS NPALRGHDLY GSASVRDKQM VRLLGKVPTI AAAVYQRMAG RAPVAPRCGL SYAENFLYML DSLGDRSYRP NPRLARAMDI LFVLHAEHEM NCSTAAARHL ASSGVDVYTA MAGATGALYG PLHGGANEAV LKMLSEIGTV QSIPEFLEGV KSRKRKMSGF GHRVYKNYDP RAKIIRGLAD EVFSIVGRDP LIEVAVALEQ AALSDEYFVS RKLYPNVDFY SGLIYRALGF PTEFFPVLFA IPRMAGYLAH WKESLADPDT KIMRPQQWYT GEGLRSYSNA HARTATHEAE ELAQIPHSNA YRRRLAGVNA GKCS |