Mp7g16450



Description

Annotation

Database ID Description
PANTHER PTHR11774 GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.50.10.20 -
SUPERFAMILY SSF48239 Terpenoid cyclases/Protein prenyltransferases
CDD cd02893 FTase
Pfam PF00432 Prenyltransferase and squalene oxidase repeat
KEGG K05954 protein farnesyltransferase subunit beta [EC:2.5.1.58]
KOG KOG0365 Beta subunit of farnesyltransferase; [O]
MapolyID Mapoly0123s0027 -
GO GO:0018342 protein prenylation
GO GO:0003824 catalytic activity
GO GO:0008318 protein prenyltransferase activity
GO GO:0005965 protein farnesyltransferase complex
GO GO:0004660 protein farnesyltransferase activity
GO GO:0018343 protein farnesylation

Nomenclature

Gene symbol Product Transcript ID Status
MpGGT3 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp7g16450.1 chr7:20463868..20470187 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp7g16450 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp7g16450 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.