Mp7g17410



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00667 Lish
Gene3D G3DSA:2.130.10.10 -
Pfam PF21359 TOPLESS, zinc finger domain
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
SMART SM00668 ctlh
ProSiteProfiles PS50896 LIS1 homology (LisH) motif profile.
PANTHER PTHR44083 TOPLESS-RELATED PROTEIN 1-RELATED
FunFam G3DSA:2.130.10.10:FF:000479 Topless-related protein 3
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like
SMART SM00320 WD40_4
Pfam PF00400 WD domain, G-beta repeat
CDD cd00200 WD40
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
ProSiteProfiles PS50897 C-terminal to LisH (CTLH) motif profile.
SUPERFAMILY SSF50978 WD40 repeat-like
FunFam G3DSA:2.130.10.10:FF:000558 Topless-related protein 1
KOG KOG0266 WD40 repeat-containing protein; [R]
KOG KOG0274 Cdc4 and related F-box and WD-40 proteins; N-term missing; [R]
KOG KOG0293 WD40 repeat-containing protein; C-term missing; [S]
KOG KOG3671 Actin regulatory protein (Wiskott-Aldrich syndrome protein); N-term missing; [TZ]
MapolyID Mapoly0051s0078 -

Nomenclature

Gene symbol Product Transcript ID Status
MpTPL Protein binding Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g17410.1 chr7:21721555..21732111 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.