Mp7g17850
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. |
| PANTHER | PTHR19878 | AUTOPHAGY PROTEIN 16-LIKE |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature |
| CDD | cd00200 | WD40 |
| Gene3D | G3DSA:2.130.10.10 | - |
| CDD | cd22887 | Atg16_CCD |
| SUPERFAMILY | SSF50978 | WD40 repeat-like |
| Coils | Coil | Coil |
| SMART | SM00320 | WD40_4 |
| Pfam | PF00400 | WD domain, G-beta repeat |
| Pfam | PF08614 | Autophagy protein 16 (ATG16) |
| Gene3D | G3DSA:1.20.5.170 | - |
| KOG | KOG0288 | WD40 repeat protein TipD; [R] |
| MapolyID | Mapoly0102s0055 | - |
| GO | GO:0000421 | autophagosome membrane |
| GO | GO:0005515 | protein binding |
| GO | GO:0000045 | autophagosome assembly |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpATG16 | Autophagy protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp7g17850 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp7g17850.1 GAAACTCGAA GCACAGACAT GCCATGCCCG GAGAAGCGAG GGCACAAGTC CCCAGTCTGC TGGAATTTAC GACGCTGCCA GAAACAAGAG AATCTGAGCC AGAGCCCGTG TCTGAGCAGC AGCAGCAGCG CGACACATTG CAGAAGTCAA TTTTGGAAAG GAGGCAGAAG AAGAGTAGAA GAACAATGTA CTAGAGGAGG AGGCCCGGAA GGACAACAGT AGTTCCCCTT CGAAATGGCA CCGGATGTTT TTACTGTTTG TTCTTGGTTT CGTGAATTGC ACTGCAAGGG AGGGCACTCT GACTCGTCTT TTTGGAGATT TGTGGAGTTT CGAGCACAAT CGTGAGTGGA TGAGGGCGGC GTGTCACCTG AGATTGAACG GGAGATTTCT TTTGTTGTCG TCGTCGAGAT TTGGTTTGGT TTGGCGCCAG GTCTTGATGA TTGTGCGATT GGTTTATCTC GTTTGATACG AGAATTCTGC TGGGAGAGAT CCGTGGCAAG TCTCTATGAT GGAGGAGAGA ATGAAAATCG CAGTTCTTCA GGCGTGTAGA GCTCTTCGTA AGCGACATAG GGACGAAGAA GGTGCTCATG GTCCTGCCAT TGCTGCTCTC GCTACAGCCG TCCGATATCA GGTACCGTCT ACTATTTGAA TCGACCACCT TCTATCGGTC TTCATGAATG TCGGTTTGTG ATTCGTCCCA TTTTGCTCCA ACATTTGTTT TAGCTGGATC AGGCTAGGCA TTTGCCTGTT TACACTGGTG AATCCCAGAA GAGACCAATT TATTCGATGC CAACTTTGCT TTAATTGCGC AAAAGACCGC TGTGCATGTT GCTGATCGCG CATGAAATCC ACAGTGGAAT GTTTACCATC GAACGATCAG AGCATGCTAT GCTTAACGTA GGTCAAGTCA GAGCTTCTGA TCCTCATACT CTGTACAGAG TATGTCCTAG AATTTGTTCG TTCAGATGTT TGAAGATAGT ATTATTAAGC AAACCGATAT TCTCTGTTTG AAATTATGTC CACTCTAATC GTTCATTGCC TTGAATCATT GTTCTATTCA AATTCGTCGT GAGTTTCAAG TGTATCTTCC TTCAGCAAGA TATTCAGTTG TGGTGGTCAA AAATTTGGTT GACGCTTTCT ATGCGTGATA CGCAACGAAA TGTGATGCTT CTGAAGAAGA TGACTGTGAG TGCTGTTTTC TCATTAGTAA TGATTGTCTC TGTTACTTCC AGAGTGCGAT CACCTGGTAT GTATGTAAGG TCTATTGAGT TCTACAACTG ACATTTAGTA TTTATGTTTC AGTTTAGAAA CACTCAATTT AAGATTATAG TTCTACGTTT ATCGTGCTTC AACATCTGCC AGAAAAAGGC AACGATGACC AATGATGGCT CATCCTGATA CAAAGTCGTA CCACATGGTT GTTGTTGAAG GGTTGCACAA TACTGATTTC TAATGCACTG GCTCAAAGTT GTCTTTTTTG TAGTAAGTAA TGTACGCTAA GTAGACTTAT TTTTCCGCCT TTGTTCCTGA TTGTAGATTC AGATTCGATT ACGGAAAATT CCAAAATGTA AAATTATTGA GAGTGTTCAT AGATTAGAGA CGCACAGACG GGAAATCTGG ATTAATTTGC CCAACTTTAG GAGAATCAGT CTTCAGCTTG AATGGGTGCA GTAAATCTGT CATGGATTGA AAGAGGGAGT GTCTTTTTTC GGCTTTATCT TTTAACACAT AAGAGATTTT TTAATCTTTC AGGGGGCTGA GCTTATAGTC AAAGTGGAGC TATTGCAGCA AGAATTGAAT CAAATATATC GTACGCATAC GGAAACAACA GGACAACTGC TGGCAGAAAA ATCTGCAAAC CAAACGTTGC TCTCACAACT TGCAGACAAG GACTCTCTAA TCACTGAGCT CCGGTCCGAA CTCTCAGCGG CAAGGTAATG AACTCTACTC AAACATTACG TGGTCAGTTG TTTTAGTGTG GACACGGTGT CTATACAGTA TATTCATTTA TTACTTGGAC TGACTACTGA CGTAGATAGC AGCGTGTCTA TGTGACAAAC TACAATATCA ACTATATGGA TGTTGACTTT AGATATTTAT ATGTAATCTT CTTAGTATGG ATTTCCTGAA AACTCACAAC ATAAGGAATC TTTGGCAGGA CAAAACTTAC AGAGTTGGAA AAGGAGGACG ATGTCCAAAA GGAAGCTATA AATACTTTAA ACTTTGAAAG GACTGAACTA AAACTGCAGA TCTTAGAGTT GGAGTCAAAA CTTTCCAAAG CAGAATTGGA TAACAAAATG CTTGTGGATC GATGGATGGA GCAAAAGATG CAAGACGCTG AACGTCTGAA TGAGGTATAC CACCACTTTC CTTTCAGGCT TACTGACGAT AAACTTTTTG CCCCTTATCA AAAGACAACT CATATCCTGG CTTGCACCTG GCTTTCACCT TTTGCAAGGG TTTCCTGTTG TGCATTGAAA CTTCGCTACA AAACCCCTTG TAGCGAAGTA TCTGTAACAA AAATATAGCG GGATATCTTC TTCTCGGCCT TTGTCCCAAG ATGACTTTGT CACTCGTGCA GGCTTCTTTA TGCCTCATCA ATAAACTCAT ATTTGGGTGA ATTCAGGCCA ACGCAATGTA TGAGGACATG ATGGAGAGGC TCAAGTCCAG CAGACTCGAG GAGCTGGCAA GACAACAAGT AGATGGAATC GTAAGGCATA GCGAAGCAGG GGCTGAATTT TATGTCGGTT CAGGCATTCC GACACACGTT CGACACACAA TACAAGCACA TGAAGGAGGA GGCGGTGCTA TAGCTTTTGA GCATGGTAGC GGAGTCCTCT TAACCGGGGG TAATGATTCC GTCGTCCGAC AGTGGGATTC GCAGGGTGGC ACTAACCTGA ACACACTTCG TGGCGCTACA GGGACTATAC TTGATTTGAC TGTTTCTTCC GACAACAAGC AGGTGCTGGC AGCTTGTAGT GACCACAAAA TCTACCTGTG GGATGCTCAA TCAGGCCGAA TAAGGCATAC TCTCACTGGT CATTCTGAGA AGGTAGTTGC TATCGACCTG AGTCCAAGTG GCAACAAGAG GGCAGTGAGT GCTTCATATG ACCGGACAAT CAAGCTTTGG GATCTGGGCA CTGGCTACGG AGTGAACACT ATAGTCTGCT ACAGCAACTG CAACTCAGTT TGTGTCACAT CTGATGGGGC GCTGATTTGT TCTGGTCATA TGGATGGAAA TTTGCGTTTC TGGGATATCA GGTCAGGAAA GCTAGCAAAC GAAGTTGCTG CGCATGGTCT TGGCATTACA TCAGTGTCTC TTTCACGAAC TGGTCATACC GTACTCACGA GTGGACGAGA CAATGCCATC AACATTTTTG ATGTACGCAG TTTAGAGATA AGAGCCACTT ATCGGTCACC CAACTTTCGA GCGGCCACAA ATTGGTGCAG GTCATGCCTG AGTCCAAATG AGAACTATGT AGCGGTGGGT TCAGCAGATG GGGCTGTGGT TGTTTGGAGC AGAAAGAATA ACGAAGGCGA ATCTGTTCTG AAGGGAGGAC ACACATATCC TGTATTGGCT TGTGCATGGA GTGGCGTGGG CAAACCCTTG GCCACTGCGG ATAAGAGTGG ACGAATTTGC ATATGGGAGT GACTTTGCAC TATCCATTTG GTGACTCCAC TTAACTTGTG CAGTACCTAG AGAGTTTAGC TCTGCAGGTG AGTTTCTTTC ATTCTTGTGT CCAGCACGTT TGGTGAAGCC AATGTGTACA GTTTAACCGA AGGCTGGAAA GACATCCTGC TAAGTTTTTG ACAAGGCTTT AAATCTTCCA AGTAGAAGGA GAAGATGAGA AGGTCGAATA TGTAGTTTAC CTTGTCATTT GTATCATGAT AGAACCTAGA TAAGTGATAA AATTTCCCAT ACGTCTTTGC ACATTCTATG CATCGACGTT TGATTTGCTG ATAGTTTTGA GAGGGTAGTC GGTGACGAAC TTTCCGATCG ATGGTCGTAT GCTTGGATGA AAATTCATGC AGCTGTTTAT GATATGTGTT CATTTTTCAT GGAGTGATAT CCTTGTGCAT GTAGTGGAGG AGCTTTGACA AGACATACAG GTCATATTTT CCAAATACTG CCATAGACAG TAGGTATATT TTCAATTAGT TTCCAAAGCT GGGCATAAGT GAGTTCTGAT TCAGTATGCG ATTCTTTGTA GTAGAAGGCC TATCTCTAGT TGTTAAACTG ACATAGTAGA CAGAACCACG ATGAAGCTGA CCTTCATCTG GCCTAGCCTG CGATTGGGCG AGGTCGATTT TTGAGGTTCA CCACTCGAGT AGGTCTGTTA TAAATTGTTC TTTGGTCTGG TCAGTTGGCT TTCAAAAGTT GAAGAACAGT TGAAGATTGT GCAATCAGAT CTCAAATGCA ACAATTAGAG ATTAATCAGG TTTGGAGATC AAGAGCTACC GGTACTGTAC AACAGCAAGT ATAGATCGTT TGAAGTTCCA AGTAATTTTA TTTCTTAGGT AGAGTTGATT GTCCATTGGC GCCTTGAAGG AAAAATGTAA AGATTTGTTC GATTGAATGA TTTTGTATGA AGTTGTTGTG CCA |
mRNA UTR + CDS |
| >Mp7g17850.1 GAAACTCGAA GCACAGACAT GCCATGCCCG GAGAAGCGAG GGCACAAGTC CCCAGTCTGC TGGAATTTAC GACGCTGCCA GAAACAAGAG AATCTGAGCC AGAGCCCGTG TCTGAGCAGC AGCAGCAGCG CGACACATTG CAGAAGTCAA TTTTGGAAAG GAGGCAGAAG AAGAGTAGAA GAACAATGTA CTAGAGGAGG AGGCCCGGAA GGACAACAGT AGTTCCCCTT CGAAATGGCA CCGGATGTTT TTACTGTTTG TTCTTGGTTT CGTGAATTGC ACTGCAAGGG AGGGCACTCT GACTCGTCTT TTTGGAGATT TGTGGAGTTT CGAGCACAAT CGTGAGTGGA TGAGGGCGGC GTGTCACCTG AGATTGAACG GGAGATTTCT TTTGTTGTCG TCGTCGAGAT TTGGTTTGGT TTGGCGCCAG GTCTTGATGA TTGTGCGATT GGTTTATCTC GTTTGATACG AGAATTCTGC TGGGAGAGAT CCGTGGCAAG TCTCTATGAT GGAGGAGAGA ATGAAAATCG CAGTTCTTCA GGCGTGTAGA GCTCTTCGTA AGCGACATAG GGACGAAGAA GGTGCTCATG GTCCTGCCAT TGCTGCTCTC GCTACAGCCG TCCGATATCA GGGGGCTGAG CTTATAGTCA AAGTGGAGCT ATTGCAGCAA GAATTGAATC AAATATATCG TACGCATACG GAAACAACAG GACAACTGCT GGCAGAAAAA TCTGCAAACC AAACGTTGCT CTCACAACTT GCAGACAAGG ACTCTCTAAT CACTGAGCTC CGGTCCGAAC TCTCAGCGGC AAGGACAAAA CTTACAGAGT TGGAAAAGGA GGACGATGTC CAAAAGGAAG CTATAAATAC TTTAAACTTT GAAAGGACTG AACTAAAACT GCAGATCTTA GAGTTGGAGT CAAAACTTTC CAAAGCAGAA TTGGATAACA AAATGCTTGT GGATCGATGG ATGGAGCAAA AGATGCAAGA CGCTGAACGT CTGAATGAGG CCAACGCAAT GTATGAGGAC ATGATGGAGA GGCTCAAGTC CAGCAGACTC GAGGAGCTGG CAAGACAACA AGTAGATGGA ATCGTAAGGC ATAGCGAAGC AGGGGCTGAA TTTTATGTCG GTTCAGGCAT TCCGACACAC GTTCGACACA CAATACAAGC ACATGAAGGA GGAGGCGGTG CTATAGCTTT TGAGCATGGT AGCGGAGTCC TCTTAACCGG GGGTAATGAT TCCGTCGTCC GACAGTGGGA TTCGCAGGGT GGCACTAACC TGAACACACT TCGTGGCGCT ACAGGGACTA TACTTGATTT GACTGTTTCT TCCGACAACA AGCAGGTGCT GGCAGCTTGT AGTGACCACA AAATCTACCT GTGGGATGCT CAATCAGGCC GAATAAGGCA TACTCTCACT GGTCATTCTG AGAAGGTAGT TGCTATCGAC CTGAGTCCAA GTGGCAACAA GAGGGCAGTG AGTGCTTCAT ATGACCGGAC AATCAAGCTT TGGGATCTGG GCACTGGCTA CGGAGTGAAC ACTATAGTCT GCTACAGCAA CTGCAACTCA GTTTGTGTCA CATCTGATGG GGCGCTGATT TGTTCTGGTC ATATGGATGG AAATTTGCGT TTCTGGGATA TCAGGTCAGG AAAGCTAGCA AACGAAGTTG CTGCGCATGG TCTTGGCATT ACATCAGTGT CTCTTTCACG AACTGGTCAT ACCGTACTCA CGAGTGGACG AGACAATGCC ATCAACATTT TTGATGTACG CAGTTTAGAG ATAAGAGCCA CTTATCGGTC ACCCAACTTT CGAGCGGCCA CAAATTGGTG CAGGTCATGC CTGAGTCCAA ATGAGAACTA TGTAGCGGTG GGTTCAGCAG ATGGGGCTGT GGTTGTTTGG AGCAGAAAGA ATAACGAAGG CGAATCTGTT CTGAAGGGAG GACACACATA TCCTGTATTG GCTTGTGCAT GGAGTGGCGT GGGCAAACCC TTGGCCACTG CGGATAAGAG TGGACGAATT TGCATATGGG AGTGACTTTG CACTATCCAT TTGGTGACTC CACTTAACTT GTGCAGTACC TAGAGAGTTT AGCTCTGCAG GTGAGTTTCT TTCATTCTTG TGTCCAGCAC GTTTGGTGAA GCCAATGTGT ACAGTTTAAC CGAAGGCTGG AAAGACATCC TGCTAAGTTT TTGACAAGGC TTTAAATCTT CCAAGTAGAA GGAGAAGATG AGAAGGTCGA ATATGTAGTT TACCTTGTCA TTTGTATCAT GATAGAACCT AGATAAGTGA TAAAATTTCC CATACGTCTT TGCACATTCT ATGCATCGAC GTTTGATTTG CTGATAGTTT TGAGAGGGTA GTCGGTGACG AACTTTCCGA TCGATGGTCG TATGCTTGGA TGAAAATTCA TGCAGCTGTT TATGATATGT GTTCATTTTT CATGGAGTGA TATCCTTGTG CATGTAGTGG AGGAGCTTTG ACAAGACATA CAGGTCATAT TTTCCAAATA CTGCCATAGA CAGTAGGTAT ATTTTCAATT AGTTTCCAAA GCTGGGCATA AGTGAGTTCT GATTCAGTAT GCGATTCTTT GTAGTAGAAG GCCTATCTCT AGTTGTTAAA CTGACATAGT AGACAGAACC ACGATGAAGC TGACCTTCAT CTGGCCTAGC CTGCGATTGG GCGAGGTCGA TTTTTGAGGT TCACCACTCG AGTAGGTCTG TTATAAATTG TTCTTTGGTC TGGTCAGTTG GCTTTCAAAA GTTGAAGAAC AGTTGAAGAT TGTGCAATCA GATCTCAAAT GCAACAATTA GAGATTAATC AGGTTTGGAG ATCAAGAGCT ACCGGTACTG TACAACAGCA AGTATAGATC GTTTGAAGTT CCAAGTAATT TTATTTCTTA GGTAGAGTTG ATTGTCCATT GGCGCCTTGA AGGAAAAATG TAAAGATTTG TTCGATTGAA TGATTTTGTA TGAAGTTGTT GTGCCA |
CDS |
| >Mp7g17850.1 ATGATGGAGG AGAGAATGAA AATCGCAGTT CTTCAGGCGT GTAGAGCTCT TCGTAAGCGA CATAGGGACG AAGAAGGTGC TCATGGTCCT GCCATTGCTG CTCTCGCTAC AGCCGTCCGA TATCAGGGGG CTGAGCTTAT AGTCAAAGTG GAGCTATTGC AGCAAGAATT GAATCAAATA TATCGTACGC ATACGGAAAC AACAGGACAA CTGCTGGCAG AAAAATCTGC AAACCAAACG TTGCTCTCAC AACTTGCAGA CAAGGACTCT CTAATCACTG AGCTCCGGTC CGAACTCTCA GCGGCAAGGA CAAAACTTAC AGAGTTGGAA AAGGAGGACG ATGTCCAAAA GGAAGCTATA AATACTTTAA ACTTTGAAAG GACTGAACTA AAACTGCAGA TCTTAGAGTT GGAGTCAAAA CTTTCCAAAG CAGAATTGGA TAACAAAATG CTTGTGGATC GATGGATGGA GCAAAAGATG CAAGACGCTG AACGTCTGAA TGAGGCCAAC GCAATGTATG AGGACATGAT GGAGAGGCTC AAGTCCAGCA GACTCGAGGA GCTGGCAAGA CAACAAGTAG ATGGAATCGT AAGGCATAGC GAAGCAGGGG CTGAATTTTA TGTCGGTTCA GGCATTCCGA CACACGTTCG ACACACAATA CAAGCACATG AAGGAGGAGG CGGTGCTATA GCTTTTGAGC ATGGTAGCGG AGTCCTCTTA ACCGGGGGTA ATGATTCCGT CGTCCGACAG TGGGATTCGC AGGGTGGCAC TAACCTGAAC ACACTTCGTG GCGCTACAGG GACTATACTT GATTTGACTG TTTCTTCCGA CAACAAGCAG GTGCTGGCAG CTTGTAGTGA CCACAAAATC TACCTGTGGG ATGCTCAATC AGGCCGAATA AGGCATACTC TCACTGGTCA TTCTGAGAAG GTAGTTGCTA TCGACCTGAG TCCAAGTGGC AACAAGAGGG CAGTGAGTGC TTCATATGAC CGGACAATCA AGCTTTGGGA TCTGGGCACT GGCTACGGAG TGAACACTAT AGTCTGCTAC AGCAACTGCA ACTCAGTTTG TGTCACATCT GATGGGGCGC TGATTTGTTC TGGTCATATG GATGGAAATT TGCGTTTCTG GGATATCAGG TCAGGAAAGC TAGCAAACGA AGTTGCTGCG CATGGTCTTG GCATTACATC AGTGTCTCTT TCACGAACTG GTCATACCGT ACTCACGAGT GGACGAGACA ATGCCATCAA CATTTTTGAT GTACGCAGTT TAGAGATAAG AGCCACTTAT CGGTCACCCA ACTTTCGAGC GGCCACAAAT TGGTGCAGGT CATGCCTGAG TCCAAATGAG AACTATGTAG CGGTGGGTTC AGCAGATGGG GCTGTGGTTG TTTGGAGCAG AAAGAATAAC GAAGGCGAAT CTGTTCTGAA GGGAGGACAC ACATATCCTG TATTGGCTTG TGCATGGAGT GGCGTGGGCA AACCCTTGGC CACTGCGGAT AAGAGTGGAC GAATTTGCAT ATGGGAGTGA |
Protein |
| >Mp7g17850.1 MMEERMKIAV LQACRALRKR HRDEEGAHGP AIAALATAVR YQGAELIVKV ELLQQELNQI YRTHTETTGQ LLAEKSANQT LLSQLADKDS LITELRSELS AARTKLTELE KEDDVQKEAI NTLNFERTEL KLQILELESK LSKAELDNKM LVDRWMEQKM QDAERLNEAN AMYEDMMERL KSSRLEELAR QQVDGIVRHS EAGAEFYVGS GIPTHVRHTI QAHEGGGGAI AFEHGSGVLL TGGNDSVVRQ WDSQGGTNLN TLRGATGTIL DLTVSSDNKQ VLAACSDHKI YLWDAQSGRI RHTLTGHSEK VVAIDLSPSG NKRAVSASYD RTIKLWDLGT GYGVNTIVCY SNCNSVCVTS DGALICSGHM DGNLRFWDIR SGKLANEVAA HGLGITSVSL SRTGHTVLTS GRDNAINIFD VRSLEIRATY RSPNFRAATN WCRSCLSPNE NYVAVGSADG AVVVWSRKNN EGESVLKGGH TYPVLACAWS GVGKPLATAD KSGRICIWE |