Mp8g01770



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF03514 GRAS domain family
ProSiteProfiles PS50985 GRAS family profile.
PANTHER PTHR31636 OSJNBA0084A10.13 PROTEIN-RELATED
KEGG K14494 DELLA protein
MapolyID Mapoly0064s0023 -
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0005634 nucleus
GO GO:0043565 sequence-specific DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpGRAS7 transcription factor, GRAS Published
MpRAM transcription factor, GRAS Provisional

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, GRAS (from nomenclature)

0 core 1 peripheral

Briones-Moreno, A., et al. (2023) · Nature Plants  research experimental comparator
GRAS-clade protein (Mp8g01770); M. polymorpha representative compared with AtSCR/AtSCL3.

Transcript models

Transcript ID Location Sequences Extract region
Mp8g01770.1 chr8:1872556..1877264 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g01770 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g01770 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.