Mp8g05020
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| CDD | cd00130 | PAS |
| Pfam | PF13426 | PAS domain |
| Gene3D | G3DSA:3.30.450.20 | PAS domain |
| NCBIfam | TIGR00229 | PAS domain S-box protein |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) |
| ProSiteProfiles | PS50113 | PAC domain profile. |
| ProSiteProfiles | PS50112 | PAS repeat profile. |
| PANTHER | PTHR47429 | PROTEIN TWIN LOV 1 |
| SMART | SM00086 | pac_2 |
| KOG | KOG0501 | K+-channel KCNQ; C-term missing; [P] |
| KOG | KOG2133 | Transcriptional corepressor Atrophin-1/DRPLA; N-term missing; C-term missing; [R] |
| MapolyID | Mapoly0081s0003 | - |
| GO | GO:0005634 | nucleus |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLOVA | LOV domain-containing protein | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp8g05020 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp8g05020.1 CTCCTTCTAC AGGCAGGCAG GCACGCAGCC GCCAGAACAG AAGAGCAGCT CGAGGAGGGC GAGCTGACCA ATCTCCGCCC CAATCCTCTC GACAAGTACA CTGCTAAACC TTGAACAGGG CTCAAATCCG CAGACTCTCA CACGCTTAAG AACTCCCCGA CCGAGGGCCG CATCTAAGGC TCGCATTCCA CTGTACGTAG TGAGTTAGTG AGTAAGTGAG TGAGAGTGAG GTAGGACGAC TGAATCATTC ACCAGCTGTT CGGAAAAGCT TCTTTCAAGA CCTAACCCCG GCGACTGTGA CGAGTGACCA GGGTGGTGAG GCTGGAGAGG AACTTGCTGG AGGAGGGGCC TTTTGAAGAG AGAGGAGGAG GAGGAGGGGA GAGAGAGAGA GGCAGGGACA TTGAGAGAAA GAGGACTATG CCGGACGCAT GTAGTCGGAG TGTAGACATT TTGGAGCAAT TCAACGTTGC AGGGAGGAGG GGAGAGATGC CGACGACGAA GAAGGGAGCG AGTCCGAGTC CGTTTCACAA AAAATTGCTC AGCCCGGGGC CGTTCCAGAA GAGGTTTCTG GGCAAGGCCG AGAAGCCTGC GCCTTTGCCC AGCAGCGGGT TCTCGAGAGA TGCGCGAGGA TCACTGGAGA TCTTCGGCGC CAGCGCGCAC AGGGGCAGCA CGCCCGTGTT CTCGAGCCCC GCCTGGCACG ATGCTCTCGA CACCGTCGAG AGCTTGTTTC AGAAATCTGA CAGCCCCGCT CGCCCCAATT CTTTGTACGG GGATGAGTCC GAAGCGTCGT CCAGCGAGAA AGGAGCGTCG AGCTTGTGGA GGACGGAGTC ACGATCTCAG ATGCCTGCAA TTGACAAGTC GCTGCCCCGA CCTCGACCCT TCCATGCCCG AGCTAAAGCC GTTTCCCCGG TTTCGATCAC TCTCGAGTAC GGCGGCAGCG ACCACGAGTT CTCGCTGGAC GCCGATTCCG ATGTTGAATT GGCTCTTCCC ATCGCGGACG GAGCTGTCAG CTTGCGCAGG GTTCCTCTGA CGCCGCATTC CCTTCACACC ACGGTGGCAG CTGTTTACCA GGAGCCAGTG GACATCGAGC AGCAGTGGCG AGCGATGCTG GACGGGACAG CTCTGAAGGC GAAGCGCGGC GGGGATTCGG TGCAGGACCA AGCGGACGAT CATTGGCAGG GAGTTTTGAA CGGGGGTGTG GAAGGGCCCG TCGCGGAAGA AGACGATGGC GACGAGAGCA TGAGGCGCAG GAGCGGAACC TCGTCCGACT ACTCTGATGA GGTGATTTCG GAGCGAGCAG CGAAGTGGGG CTATGGAGTT CCCATGCGCG CCTCGACGGA GTTCGGGGAC GGTCATTCCA CCGTCTCGTG GAGAACGAGC AACAGGTCCT CGGGAAGCAG ATCATCGGGA GGAAGCACGT CGTCGCAGAC CATTCCACGA GTCGCCAAGG ATGTTAGGGA CGCCATCACT TCTTTCAACC TCGCCTTCGT CGTCTGCGAC GCCACTGGCG CTGATCCCAA GTACCCGATT CTCTACGCGA GCGGAGGGTT CTTCAAAATG ACCGGATACG AGGCCGACGA AATCATCGGC AGCAACTGGT ATGTCGATTC CTCCGACACC GCGCTCGAAT TTGAGCATTT TGCGGTGCTT CTTGATGATC CTTTCACGTC CAGTTCTCAA ATCTCGATTC ATAATCCTTC GTAAACTCAC CGATTAATTT CATTTTGTCC TGCAGCCGAA TCCTTCAAGG ACCTGGCACC GAGCAAAAGG AGGTCGAGAA AATCAGAAAG GCTCTCCGAG CCGGAGCCGC CTACAACGGC AAGATTCTGA ACTACAAGAA GGACGGGACT CCATTCTGGA ACGTGCTCTC CATGTCGCCC ATCAGGAACA ACGAAGGCCA AGTCATCAAA TACATTGGGT AAGTAAGAAC CCCGTGACAG TCCCATATCA AGTCGATCAC ACTCTCTATG CAGCAATTTT TTTAGCAATT CGATGAGTCT TTTTCCGCTG GACGAGCATG CGGTCTGATA ATTCGTTGCT TCCGATTTGC TGTTTCCAGT ATGCAAGCTG AAGCTTCCGA GAAGTGCTCG AAGCCGAAAT CGGAGAAGAA GACGGTGACC GCAGTAGTGT CGAAGGAGAC CGTCGTCGGG CAGAAGCCCA AGGCCAAGCC CGCATTCGCG CCCGCGGCCT ACATCCCCGA GATTTCCCTA CCGCCGCTGA GGGACGAGGC GGAGGACGCC ATGCCCAGGG TCAGTTACCG TTACTCGCTG TCCAAGTCCC GACAATCGAA CGAGTCCGCG GCCGATTGGC ACGCGCTGGC GCGCCTGAGG GCGGAGATTG TGTCCTCGGC CCGAGCCTTG GGGGACGCCC CTCCCCCGCC CGTGGTCAGA GGGATGAAGG TTGCGAACAG CCCGCGCACC CGACGAGTCG CCCGGCTTTT CAGGTCAGTC CTCTGCCTCT CTCTCTCTGC CTCTGCGATC GATTTGCCGT CTAAATCCGG TGGTCATGTG CTGGACCTGC CGACAGAATT TTGAGGCGCT TGTATAATTG GCAGCTGTGA GTTTTTGCGC TTTCTAAATC GGCGTGCTGA TGATTGTCGT CCCGTTTATT TTTCAGCAAA TTGAACTCGA AACTCTCGGA CCGCATGAGA ACCCCGGAAA TCGAGTACGT GGATTGCGAG AGGGATGAGA AGGCCTTGAG TACTCTGATC GAATCGGACC CGGAGAGACG TCGACGCAGC AGTATCTTCT CGCGGACCTC TGCGGACTTC AGATTGGACG GGCCCTCCGA CTTCAGCACG CTGGAGATTC CCGAGAGGGG CGATCGCTTG AGCAGCAGCC ATTGTACTAT CCCCACGGTC ACGCACGGCG GAAGGAGTCA GTTCGTCATC ATCCACTAGA TTGCATCCTT TCGATCGGCG ACCTCGACGC CGACGCAATC ACTCAATTTT GACACCAGAG ACACCGTGAA CATATCCTCG AGGTCCGCAG CCTTCGCCGA CCAGATTATG ATGACTCGTA CTCCGACCAA AGAGCGTTTC TCACGATACA GTCTTCGGAT CCACTCACGC GATTCTCCCC CTCTCCCCTT CAGTACATAA TCTAGTAAAT AGGAGTGTGT TCTCATAGAA AGTGGACGAT GGACCATGCA TACAAAAACT GCCAATTGTG CAGCTTCGGT CTCTACTACG AACGGGAGAA ATGCACTGGA TTTCGATGTG GCCTTGCATT GCAACGAGTC TTGTCTTGGG GGAAAAGGCC GGCTTGTTTA TACTGGCATT TCGTTTCCAT ATTCTATACT ACCCATAGAG AGTCTGCTGG TTAAGATTCA TGCTTGAGGA TGTTTCTTAA ACTGCCAGCA TCTGTACTTG AAGTATATTC TTTGTGGCGG TGACGTTCAT CGCCACCACC ACCACGCTAA ATTTTGTTAG ATAGTAAGAG TTTGTACTAC GCGACACATA CATGTCAGCC GAAGAAGAAT GTAAATATGG ACTGAGTTCT ATCAAATTTT TTTCCAGC |
mRNA UTR + CDS |
| >Mp8g05020.1 CTCCTTCTAC AGGCAGGCAG GCACGCAGCC GCCAGAACAG AAGAGCAGCT CGAGGAGGGC GAGCTGACCA ATCTCCGCCC CAATCCTCTC GACAAGTACA CTGCTAAACC TTGAACAGGG CTCAAATCCG CAGACTCTCA CACGCTTAAG AACTCCCCGA CCGAGGGCCG CATCTAAGGC TCGCATTCCA CTGTACGTAG TGAGTTAGTG AGTAAGTGAG TGAGAGTGAG GTAGGACGAC TGAATCATTC ACCAGCTGTT CGGAAAAGCT TCTTTCAAGA CCTAACCCCG GCGACTGTGA CGAGTGACCA GGGTGGTGAG GCTGGAGAGG AACTTGCTGG AGGAGGGGCC TTTTGAAGAG AGAGGAGGAG GAGGAGGGGA GAGAGAGAGA GGCAGGGACA TTGAGAGAAA GAGGACTATG CCGGACGCAT GTAGTCGGAG TGTAGACATT TTGGAGCAAT TCAACGTTGC AGGGAGGAGG GGAGAGATGC CGACGACGAA GAAGGGAGCG AGTCCGAGTC CGTTTCACAA AAAATTGCTC AGCCCGGGGC CGTTCCAGAA GAGGTTTCTG GGCAAGGCCG AGAAGCCTGC GCCTTTGCCC AGCAGCGGGT TCTCGAGAGA TGCGCGAGGA TCACTGGAGA TCTTCGGCGC CAGCGCGCAC AGGGGCAGCA CGCCCGTGTT CTCGAGCCCC GCCTGGCACG ATGCTCTCGA CACCGTCGAG AGCTTGTTTC AGAAATCTGA CAGCCCCGCT CGCCCCAATT CTTTGTACGG GGATGAGTCC GAAGCGTCGT CCAGCGAGAA AGGAGCGTCG AGCTTGTGGA GGACGGAGTC ACGATCTCAG ATGCCTGCAA TTGACAAGTC GCTGCCCCGA CCTCGACCCT TCCATGCCCG AGCTAAAGCC GTTTCCCCGG TTTCGATCAC TCTCGAGTAC GGCGGCAGCG ACCACGAGTT CTCGCTGGAC GCCGATTCCG ATGTTGAATT GGCTCTTCCC ATCGCGGACG GAGCTGTCAG CTTGCGCAGG GTTCCTCTGA CGCCGCATTC CCTTCACACC ACGGTGGCAG CTGTTTACCA GGAGCCAGTG GACATCGAGC AGCAGTGGCG AGCGATGCTG GACGGGACAG CTCTGAAGGC GAAGCGCGGC GGGGATTCGG TGCAGGACCA AGCGGACGAT CATTGGCAGG GAGTTTTGAA CGGGGGTGTG GAAGGGCCCG TCGCGGAAGA AGACGATGGC GACGAGAGCA TGAGGCGCAG GAGCGGAACC TCGTCCGACT ACTCTGATGA GGTGATTTCG GAGCGAGCAG CGAAGTGGGG CTATGGAGTT CCCATGCGCG CCTCGACGGA GTTCGGGGAC GGTCATTCCA CCGTCTCGTG GAGAACGAGC AACAGGTCCT CGGGAAGCAG ATCATCGGGA GGAAGCACGT CGTCGCAGAC CATTCCACGA GTCGCCAAGG ATGTTAGGGA CGCCATCACT TCTTTCAACC TCGCCTTCGT CGTCTGCGAC GCCACTGGCG CTGATCCCAA GTACCCGATT CTCTACGCGA GCGGAGGGTT CTTCAAAATG ACCGGATACG AGGCCGACGA AATCATCGGC AGCAACTGCC GAATCCTTCA AGGACCTGGC ACCGAGCAAA AGGAGGTCGA GAAAATCAGA AAGGCTCTCC GAGCCGGAGC CGCCTACAAC GGCAAGATTC TGAACTACAA GAAGGACGGG ACTCCATTCT GGAACGTGCT CTCCATGTCG CCCATCAGGA ACAACGAAGG CCAAGTCATC AAATACATTG GTATGCAAGC TGAAGCTTCC GAGAAGTGCT CGAAGCCGAA ATCGGAGAAG AAGACGGTGA CCGCAGTAGT GTCGAAGGAG ACCGTCGTCG GGCAGAAGCC CAAGGCCAAG CCCGCATTCG CGCCCGCGGC CTACATCCCC GAGATTTCCC TACCGCCGCT GAGGGACGAG GCGGAGGACG CCATGCCCAG GGTCAGTTAC CGTTACTCGC TGTCCAAGTC CCGACAATCG AACGAGTCCG CGGCCGATTG GCACGCGCTG GCGCGCCTGA GGGCGGAGAT TGTGTCCTCG GCCCGAGCCT TGGGGGACGC CCCTCCCCCG CCCGTGGTCA GAGGGATGAA GGTTGCGAAC AGCCCGCGCA CCCGACGAGT CGCCCGGCTT TTCAGCAAAT TGAACTCGAA ACTCTCGGAC CGCATGAGAA CCCCGGAAAT CGAGTACGTG GATTGCGAGA GGGATGAGAA GGCCTTGAGT ACTCTGATCG AATCGGACCC GGAGAGACGT CGACGCAGCA GTATCTTCTC GCGGACCTCT GCGGACTTCA GATTGGACGG GCCCTCCGAC TTCAGCACGC TGGAGATTCC CGAGAGGGGC GATCGCTTGA GCAGCAGCCA TTGTACTATC CCCACGGTCA CGCACGGCGG AAGGAGTCAG TTCGTCATCA TCCACTAGAT TGCATCCTTT CGATCGGCGA CCTCGACGCC GACGCAATCA CTCAATTTTG ACACCAGAGA CACCGTGAAC ATATCCTCGA GGTCCGCAGC CTTCGCCGAC CAGATTATGA TGACTCGTAC TCCGACCAAA GAGCGTTTCT CACGATACAG TCTTCGGATC CACTCACGCG ATTCTCCCCC TCTCCCCTTC AGTACATAAT CTAGTAAATA GGAGTGTGTT CTCATAGAAA GTGGACGATG GACCATGCAT ACAAAAACTG CCAATTGTGC AGCTTCGGTC TCTACTACGA ACGGGAGAAA TGCACTGGAT TTCGATGTGG CCTTGCATTG CAACGAGTCT TGTCTTGGGG GAAAAGGCCG GCTTGTTTAT ACTGGCATTT CGTTTCCATA TTCTATACTA CCCATAGAGA GTCTGCTGGT TAAGATTCAT GCTTGAGGAT GTTTCTTAAA CTGCCAGCAT CTGTACTTGA AGTATATTCT TTGTGGCGGT GACGTTCATC GCCACCACCA CCACGCTAAA TTTTGTTAGA TAGTAAGAGT TTGTACTACG CGACACATAC ATGTCAGCCG AAGAAGAATG TAAATATGGA CTGAGTTCTA TCAAATTTTT TTCCAGC |
CDS |
| >Mp8g05020.1 ATGCCGGACG CATGTAGTCG GAGTGTAGAC ATTTTGGAGC AATTCAACGT TGCAGGGAGG AGGGGAGAGA TGCCGACGAC GAAGAAGGGA GCGAGTCCGA GTCCGTTTCA CAAAAAATTG CTCAGCCCGG GGCCGTTCCA GAAGAGGTTT CTGGGCAAGG CCGAGAAGCC TGCGCCTTTG CCCAGCAGCG GGTTCTCGAG AGATGCGCGA GGATCACTGG AGATCTTCGG CGCCAGCGCG CACAGGGGCA GCACGCCCGT GTTCTCGAGC CCCGCCTGGC ACGATGCTCT CGACACCGTC GAGAGCTTGT TTCAGAAATC TGACAGCCCC GCTCGCCCCA ATTCTTTGTA CGGGGATGAG TCCGAAGCGT CGTCCAGCGA GAAAGGAGCG TCGAGCTTGT GGAGGACGGA GTCACGATCT CAGATGCCTG CAATTGACAA GTCGCTGCCC CGACCTCGAC CCTTCCATGC CCGAGCTAAA GCCGTTTCCC CGGTTTCGAT CACTCTCGAG TACGGCGGCA GCGACCACGA GTTCTCGCTG GACGCCGATT CCGATGTTGA ATTGGCTCTT CCCATCGCGG ACGGAGCTGT CAGCTTGCGC AGGGTTCCTC TGACGCCGCA TTCCCTTCAC ACCACGGTGG CAGCTGTTTA CCAGGAGCCA GTGGACATCG AGCAGCAGTG GCGAGCGATG CTGGACGGGA CAGCTCTGAA GGCGAAGCGC GGCGGGGATT CGGTGCAGGA CCAAGCGGAC GATCATTGGC AGGGAGTTTT GAACGGGGGT GTGGAAGGGC CCGTCGCGGA AGAAGACGAT GGCGACGAGA GCATGAGGCG CAGGAGCGGA ACCTCGTCCG ACTACTCTGA TGAGGTGATT TCGGAGCGAG CAGCGAAGTG GGGCTATGGA GTTCCCATGC GCGCCTCGAC GGAGTTCGGG GACGGTCATT CCACCGTCTC GTGGAGAACG AGCAACAGGT CCTCGGGAAG CAGATCATCG GGAGGAAGCA CGTCGTCGCA GACCATTCCA CGAGTCGCCA AGGATGTTAG GGACGCCATC ACTTCTTTCA ACCTCGCCTT CGTCGTCTGC GACGCCACTG GCGCTGATCC CAAGTACCCG ATTCTCTACG CGAGCGGAGG GTTCTTCAAA ATGACCGGAT ACGAGGCCGA CGAAATCATC GGCAGCAACT GCCGAATCCT TCAAGGACCT GGCACCGAGC AAAAGGAGGT CGAGAAAATC AGAAAGGCTC TCCGAGCCGG AGCCGCCTAC AACGGCAAGA TTCTGAACTA CAAGAAGGAC GGGACTCCAT TCTGGAACGT GCTCTCCATG TCGCCCATCA GGAACAACGA AGGCCAAGTC ATCAAATACA TTGGTATGCA AGCTGAAGCT TCCGAGAAGT GCTCGAAGCC GAAATCGGAG AAGAAGACGG TGACCGCAGT AGTGTCGAAG GAGACCGTCG TCGGGCAGAA GCCCAAGGCC AAGCCCGCAT TCGCGCCCGC GGCCTACATC CCCGAGATTT CCCTACCGCC GCTGAGGGAC GAGGCGGAGG ACGCCATGCC CAGGGTCAGT TACCGTTACT CGCTGTCCAA GTCCCGACAA TCGAACGAGT CCGCGGCCGA TTGGCACGCG CTGGCGCGCC TGAGGGCGGA GATTGTGTCC TCGGCCCGAG CCTTGGGGGA CGCCCCTCCC CCGCCCGTGG TCAGAGGGAT GAAGGTTGCG AACAGCCCGC GCACCCGACG AGTCGCCCGG CTTTTCAGCA AATTGAACTC GAAACTCTCG GACCGCATGA GAACCCCGGA AATCGAGTAC GTGGATTGCG AGAGGGATGA GAAGGCCTTG AGTACTCTGA TCGAATCGGA CCCGGAGAGA CGTCGACGCA GCAGTATCTT CTCGCGGACC TCTGCGGACT TCAGATTGGA CGGGCCCTCC GACTTCAGCA CGCTGGAGAT TCCCGAGAGG GGCGATCGCT TGAGCAGCAG CCATTGTACT ATCCCCACGG TCACGCACGG CGGAAGGAGT CAGTTCGTCA TCATCCACTA G |
Protein |
| >Mp8g05020.1 MPDACSRSVD ILEQFNVAGR RGEMPTTKKG ASPSPFHKKL LSPGPFQKRF LGKAEKPAPL PSSGFSRDAR GSLEIFGASA HRGSTPVFSS PAWHDALDTV ESLFQKSDSP ARPNSLYGDE SEASSSEKGA SSLWRTESRS QMPAIDKSLP RPRPFHARAK AVSPVSITLE YGGSDHEFSL DADSDVELAL PIADGAVSLR RVPLTPHSLH TTVAAVYQEP VDIEQQWRAM LDGTALKAKR GGDSVQDQAD DHWQGVLNGG VEGPVAEEDD GDESMRRRSG TSSDYSDEVI SERAAKWGYG VPMRASTEFG DGHSTVSWRT SNRSSGSRSS GGSTSSQTIP RVAKDVRDAI TSFNLAFVVC DATGADPKYP ILYASGGFFK MTGYEADEII GSNCRILQGP GTEQKEVEKI RKALRAGAAY NGKILNYKKD GTPFWNVLSM SPIRNNEGQV IKYIGMQAEA SEKCSKPKSE KKTVTAVVSK ETVVGQKPKA KPAFAPAAYI PEISLPPLRD EAEDAMPRVS YRYSLSKSRQ SNESAADWHA LARLRAEIVS SARALGDAPP PPVVRGMKVA NSPRTRRVAR LFSKLNSKLS DRMRTPEIEY VDCERDEKAL STLIESDPER RRRSSIFSRT SADFRLDGPS DFSTLEIPER GDRLSSSHCT IPTVTHGGRS QFVIIH |