Mp8g05200



Description

Annotation

Database ID Description
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Gene3D G3DSA:2.10.25.10 Laminin
FunFam G3DSA:2.10.25.10:FF:000038 Fibrillin 2
CDD cd14066 STKc_IRAK
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
FunFam G3DSA:3.30.200.20:FF:000162 Adenine nucleotide alpha hydrolase-like domain kinase
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
SMART SM00181 egf_5
PANTHER PTHR46008 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4
Pfam PF12947 EGF domain
ProSiteProfiles PS50026 EGF-like domain profile.
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding
Pfam PF00069 Protein kinase domain
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
FunFam G3DSA:1.10.510.10:FF:000161 Wall-associated receptor kinase-like 20
SMART SM00179 egfca_6
ProSiteProfiles PS50011 Protein kinase domain profile.
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
SMART SM00220 serkin_6
CDD cd00054 EGF_CA
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG1214 Nidogen and related basement membrane protein proteins; N-term missing; C-term missing; [MW]
MapolyID Mapoly0081s0021 -
GO GO:0005509 calcium ion binding
GO GO:0005524 ATP binding
GO GO:0030247 polysaccharide binding
GO GO:0004672 protein kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0016310 phosphorylation
GO GO:0016301 kinase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_WAK_LRK10L-8 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp8g05200.1 chr8:7310009..7313940 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g05200.2 chr8:7310009..7313940 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g05200.3 chr8:7310009..7313940 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g05200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g05200 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.