Mp8g05280



Description

Annotation

Database ID Description
ProSitePatterns PS01219 Ammonium transporters signature.
Pfam PF00909 Ammonium Transporter Family
FunFam G3DSA:1.10.3430.10:FF:000006 Ammonium transporter
Gene3D G3DSA:1.10.3430.10 Ammonium transporter AmtB like domains
SUPERFAMILY SSF111352 Ammonium transporter
PANTHER PTHR11730 AMMONIUM TRANSPORTER
MobiDBLite mobidb-lite consensus disorder prediction
NCBIfam TIGR00836 ammonium transporter
KEGG K03320 ammonium transporter, Amt family
KOG KOG0682 Ammonia permease; [P]
MapolyID Mapoly0081s0029 -
GO GO:0072488 ammonium transmembrane transport
GO GO:0005887 plasma membrane
GO GO:0008519 ammonium channel activity
GO GO:0097272 ammonium homeostasis
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpAMT1.4 ammonium transporter Published

Transcript models

Transcript ID Location Sequences Extract region
Mp8g05280.1 chr8:7416448..7419127 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g05280 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g05280 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.