Mp8g05890



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
SUPERFAMILY SSF54928 RNA-binding domain, RBD
Pfam PF00076 RNA recognition motif
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
Pfam PF05391 Lsm interaction motif
SUPERFAMILY SSF48452 TPR-like
SMART SM00360 rrm1_1
SMART SM00386 hat_new_1
Gene3D G3DSA:3.30.70.330 -
PANTHER PTHR17204 PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
KEGG K22611 squamous cell carcinoma antigen recognized by T-cells 3
KOG KOG0128 RNA-binding protein SART3 (RRM superfamily); [A]
MapolyID Mapoly0013s0201 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSEAP1 RNA-binding protein SART3 (RRM superfamily) Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g05890.1 chr8:8087414..8095613 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.