Mp8g09160



Description

Annotation

Database ID Description
KOG KOG1983 Tomosyn and related SNARE-interacting proteins; [U]
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd15873 R-SNARE_STXBP5_6
Gene3D G3DSA:2.130.10.10 -
SUPERFAMILY SSF58038 SNARE fusion complex
PANTHER PTHR10241:SF38 TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
Coils Coil Coil
SMART SM00320 WD40_4
PANTHER PTHR10241 LETHAL 2 GIANT LARVAE PROTEIN
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like
SUPERFAMILY SSF50978 WD40 repeat-like
ProSiteProfiles PS50892 v-SNARE coiled-coil homology domain profile.
Pfam PF00957 Synaptobrevin
Gene3D G3DSA:1.20.5.110 -
MapolyID Mapoly0063s0003 -

Nomenclature

Gene symbol Product Transcript ID Status
MpTOMOSYN11 Ortholog of Arabidopsis TOMOSYN1 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g09160.1 chr8:10452251..10465593 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp8g09160.2 chr8:10452248..10465593 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.