Mp8g09680



Description

Annotation

Database ID Description
CDD cd00159 RhoGAP
CDD cd00821 PH
Coils Coil Coil
Gene3D G3DSA:1.10.555.10 Rho GTPase activation protein
Gene3D G3DSA:2.30.29.30 -
KOG KOG0161 Myosin class II heavy chain; N-term missing; C-term missing; [Z]
KOG KOG4271 Rho-GTPase activating protein; [T]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR46265 RHO GTPASE-ACTIVATING PROTEIN 7
Pfam PF00169 PH domain
Pfam PF00620 RhoGAP domain
Pfam PF14389 Leucine-zipper of ternary complex factor MIP1
ProSiteProfiles PS50003 PH domain profile.
ProSiteProfiles PS50238 Rho GTPase-activating proteins domain profile.
SMART SM00233 PH_update
SMART SM00324 RhoGAP_3
SUPERFAMILY SSF48350 GTPase activation domain, GAP
SUPERFAMILY SSF50729 PH domain-like
GO GO:0007165 signal transduction
MapolyID Mapoly0008s0253 -

Nomenclature

Gene symbol Product Transcript ID Status
MpREN Provisional

Associated Literature (AI-based literature mining)

REN1-like RhoGAP (from nomenclature)

0 core 1 peripheral

Rong, D., et al. (2022) · PNAS  research citation background
RhoGAP ortholog cited from prior work; knockout reportedly causes rhizoid growth defects, supporting ROP pathway context.

Transcript models

Transcript ID Location Sequences Extract region
Mp8g09680.1 chr8:13118952..13129950 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g09680 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g09680 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.