Mp8g11850



Description

Annotation

Database ID Description
Pfam PF03110 SBP domain
Gene3D G3DSA:4.10.1100.10 -
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51141 Zinc finger SBP-type profile.
PANTHER PTHR31251 SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4
SUPERFAMILY SSF103612 SBT domain
MapolyID Mapoly0008s0031 -
GO GO:0005634 nucleus
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpSPL4 transcription factor, SPL Published

Associated Literature (AI-based literature mining, Beta-version)

AtSPL7-like SPL gene whose expression was downregulated in Mpspl3 knockout mutants under white light in this study, placing it downstream of MpSPL3.

1 core 3 peripheral

Alisha A, Jarmolowski A, Szweykowska-Kulinska Z, Sierocka I. (2026) · The Plant journal : for cell and molecular biology  research experimental subject
AtSPL7-like SPL gene whose expression was downregulated in Mpspl3 knockout mutants under white light in this study, placing it downstream of MpSPL3.
Pietrykowska, H., et al. (2023) · Plant Molecular Biology  review citation background
miRNA/tasiRNA target module (Pietrykowska 2023)
Streubel, S., et al. (2023) · Current Biology  research sequence comparator
SPL family member (comparison).
Alisha, A., et al. (2024) · Scientific Reports  research sequence background
One of four M. polymorpha SPL protein sequences used as a query and classified phylogenetically; no specific finding.

Transcript models

Transcript ID Location Sequences Extract region
Mp8g11850.1 chr8:15348335..15355474 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp8g11850 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp8g11850 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.