Mp8g16010



Description

Annotation

Database ID Description
KEGG K08500 syntaxin of plants SYP6
KOG KOG3202 SNARE protein TLG1/Syntaxin 6; [U]
SUPERFAMILY SSF47661 t-snare proteins
CDD cd15841 SNARE_Qc
Gene3D G3DSA:1.20.58.90 -
SMART SM00397 tSNARE_6
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
PANTHER PTHR19957 SYNTAXIN
Gene3D G3DSA:1.20.5.110 -
PANTHER PTHR19957:SF224 SYNTAXIN-61
SUPERFAMILY SSF58038 SNARE fusion complex
Pfam PF09177 Syntaxin 6, N-terminal
MapolyID Mapoly0079s0013 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP6B Ortholog of Arabidopsis SYP61 gene Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp8g16010.1 chr8:17995223..17999406 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.