MpUg00290



Description

Annotation

Database ID Description
Coils Coil Coil
FunFam G3DSA:1.10.10.10:FF:000057 Heat shock transcription factor 1
Gene3D G3DSA:1.10.10.10 -
KEGG K09419 heat shock transcription factor, other eukaryote
KOG KOG0627 Heat shock transcription factor; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR10015 HEAT SHOCK TRANSCRIPTION FACTOR
PRINTS PR00056 Heat shock factor (HSF) domain signature
Pfam PF00447 HSF-type DNA-binding
ProSitePatterns PS00434 HSF-type DNA-binding domain signature.
SMART SM00415 hsfneu3
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
GO GO:0005634 nucleus
GO GO:0034605 cellular response to heat
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0043565 sequence-specific DNA binding
GO GO:0006357 regulation of transcription by RNA polymerase II
MapolyID Mapoly0018s0001 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining)

Female (U chromosome) variant of MpHSFA1; Mphsfa1U CRISPR knockout characterized under heat. Expressed ~2-2.5-fold lower than MpHSFA1V and its promoter lacks heat shock elements, correlating with higher heat sensitivity in female (BC3) plants.

1 core 2 peripheral

Wu, T.-Y., et al. (2022a) · Plant Cell  research experimental subject
Female (U chromosome) variant of MpHSFA1; Mphsfa1U CRISPR knockout characterized under heat. Expressed ~2-2.5-fold lower than MpHSFA1V and its promoter lacks heat shock elements, correlating with higher heat sensitivity in female (BC3) plants.
Fu, Y., et al. (2025) · Journal of Integrative Plant Biology: doi: 10.1111/jipb.13867  research sequence comparator
An ancestral U-chromosome gene queried by BLASTP homology searches and located on various autosomes across the Ricciaceae species.
Marchetti, F., et al. (2021) · Plant Cell and Environment  research citation background
Review: heat-shock transcription factor in the Mp heat-stress network.

Transcript models

Transcript ID Location Sequences Extract region
MpUg00290.1 chrU:3728806..3732455 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX


Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.