MpVg00970



Description

Annotation

Database ID Description
CDD cd12325 RRM1_hnRNPA_hnRNPD_like
CDD cd12330 RRM2_Hrp1p
FunFam G3DSA:3.30.70.330:FF:000051 Heterogeneous nuclear ribonucleoprotein 1
FunFam G3DSA:3.30.70.330:FF:000102 Heterogeneous nuclear ribonucleoprotein 1
Gene3D G3DSA:3.30.70.330 -
KOG KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; C-term missing; [A]
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR48032 RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6
PRINTS PR01228 Eggshell protein signature
Pfam PF00076 RNA recognition motif
ProSiteProfiles PS50102 Eukaryotic RNA Recognition Motif (RRM) profile.
SMART SM00360 rrm1_1
SUPERFAMILY SSF54928 RNA-binding domain, RBD
GO GO:0003729 mRNA binding
GO GO:0003676 nucleic acid binding
GO GO:0006417 regulation of translation
GO GO:0003723 RNA binding
MapolyID MapolyY_A0025 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining)

M. polymorpha UV-chromosome gametolog from the ancestral stratum, cited as a comparator homologous to a Blasia pusilla gametolog pair.

0 core 1 peripheral

Yue Y, Sablok G, He X, Hyvönen J, Dong S, Potente G, Liu Y, Szövényi P. (2026) · Genome Biology  research citation comparator
M. polymorpha UV-chromosome gametolog from the ancestral stratum, cited as a comparator homologous to a Blasia pusilla gametolog pair.

Transcript models

Transcript ID Location Sequences Extract region
MpVg00970.1 chrV:5892807..5896277 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00970.2 chrV:5892899..5896347 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
MpVg00970.3 chrV:5893431..5896277 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of MpVg00970 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of MpVg00970 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.