Mapoly0001s0341



Description

EREBP-like factor

Annotation

Database ID Description
GO GO:0006355 regulation of transcription, DNA-dependent
PANTHER PTHR31677 FAMILY NOT NAMED
PFAM PF00847 AP2 domain
GO GO:0003700 sequence-specific DNA binding transcription factor activity
KEGGORTH K09286 EREBP-like factor

Nomenclature

Gene symbol Product Transcript ID Status
MpERF1 transcription factor, AP2/ERF Published
MpERF1 is assigned to Mapoly0001s0341 (Mp1g20040) in the Table S7 (List of TF in Mp) of the genome paper, which is sequentially numbered in the ascending order of the Mapoly gene number. Whereas in Table S8, it is assigned to Mapoly0068s0088 (Mp7g09350) based on the homology to AtERF1. For consistency with all the ERF-family genes (MpERF1-MpERF23) defined in Table S7, we recommend to use MpERF1 to denote Mapoly0001s0341 (Mp1g20040) and MpERF15 to denote Mapoly0068s0088 (Mp7g09350). Note also that 'MpERF1' referred to in Li et al. (Nature Plants, 2020, doi:10.1038/s41477-020-00784-y) corresponds to MpERF15 in this database.

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0001s0341.1 scaffold_1:3713754..3715950 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.