Uncharacterized PHD Zn-finger protein
Database | ID | Description |
---|---|---|
GO | GO:0042393 | histone binding |
PFAM | PF12165 | Domain of unknown function (DUF3594) |
GO | GO:0006355 | regulation of transcription, DNA-dependent |
KOG | KOG1632 | Uncharacterized PHD Zn-finger protein |
PFAM | PF00628 | PHD-finger |
GO | GO:0005515 | protein binding |
PANTHER | PTHR12321 | CPG BINDING PROTEIN |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpALFIN1 | transcription factor, Alfin1-like | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0029s0079.1 CTCGGGTGCC TGATCTGCGA GTTGTGGTGG CAAAGAAGGG TTCTCGCGAG AAGGGTATTC AAGATGCGCA GTCGCCCGCT GGCTAGCTCT AGTGCGGCGT GGAGTCTTGT TAGCGATTTC TCTTCCCCCT CCTCTTGCAA CCTCGTCTCG ATTGAATTTG CGGCGCCTAT CTTGAAGACT GTGTAGGTCG CACTGTCGTT TAGAGCACCG AGCGCGAGTT CGAAAGGCGG CGGGCTAACT TTCTTTGTAG GTGTGTTTTG AGAGCCCCTC GAGTGCAATG GAGGGAGGGT CGATGTCCAC TGACCCTCGC ACTGTGGAAG AAGTCTTCAA GGATTTCAAA GGCCGGCGAG CGGGAATGCT CAAAGCCCTG ACCTCCGGTG AGTGTTGATG CCCGAGTCAA CCTGCCTGGC TGCGTCCGAT GCCAATCGCC TTCTCTGCCT GCCTCCTCTC GAGTCTCGTC GGATGTTTTC TTGTCGCCGA CTGCAAGCTG CCTCTCGAGG TCGTCTGGCG ACCTCGTCGC TTCGCTGATC TGGGTCTCTG CCAATTGACA TAGACCGCGG TTCGGTGAAG TTCTTGGTCT CCGGAGTTGT CTGATGCTTT CCTTTCGCGC CTCTGATGCC TCTCTTTGTA CCTTCCTCTG CGACGACTTC TCAACTGGGA AGTTTACAGT TCGGCCAGCA GGAATTGGTA GCTCGTCTTC AGTATAGCAC AGTTGCTGTT TAAGGTCGTC AGGTCTTAAC ACGCTCGTCT CCTTTGCCGA GCCGTTTTTG TCAGTTTTCA ACTTTGTTTT CAAAATCACC GCGGGAAACT GACGACATGT GTTCTGGTTG CATGTGCAGA CGTCGAGGAA TTCTTCCTCC AGTGCGATCC AGGTTGGCTT ACAGATTTTG GAACTATATT CTTGACGTAA TTGCTCTGAG TGTTTTGTTT TGACTAGTCT AAGTGACATG TGACCTGCTC AGTTCTCGTT GAACTCTGGT CGGATATATT GCGCCTTCCG CGACTCGTCG TTGTTGGTGA CCGACGGGGT AATGTGATGT TTTTCTGCAG AGAAGGAGAA TCTGTGTCTT TATGGCTTTC CTGACGAAGG ATGGGAAGTC AATCTTCCTT CAGAGGAAGT ACCACCTGAG CTCCCAGAGC CCGCTTTGGG GATCAACTTT GCAAGAGACG GCATGCTGCG GAAAGATTGG TTGTCACTTG TCGCCGTCCA CAGCGACGCG TGGCTTCTTG CTGTCTCGTA TTTTTATGGC GCTCGACTTG ACAAAAATGA GAGGTGAGGG TCGGCGCCTG CTCCCGCGAC GACACTTACT TTTAGGGTCT CCTGATCCCT GTTCTTGCTA GTCACTGTCG AATGTCGCCA ATCTCCACAG CGATCGCGTT GACAAGTGAA CAACTTGCTG GCTTGCTTCT CGATCTTGAG CTTAGAAGGA CTGCCTTTTT TTATGTGAGC TGAGTGATAG GCCTTTGATG CCAACCCCGG ATTGCACTCG ACGATATTAT ACCGACACCT GCTTACTTAT CTTCAAAGCT GTGGTTTGAA TCAATTTAAT TGTGTTGCCA TCGGGAACTC CACCAATGTA CGCGTTGGCA GCTTGCATTA CAATTCGGAA GACGCAGTTT TACGAGCTGG CCTTGAAATG CATGGCACGG AGGCACTTGC TTTCTCGTTG GGGTTCTCCG CACTTTGAAA AGACACCTCA TTTTCTCTTG GACATTTGCA TTTTATTCAG AAACTTTCGC GCCGTGCCCT TGCACTCAGT GACATTTCCA GCCGCATTGC CGCCGCTCGA AATCGTTTTA CCCCCACATG TCACAACTGA CTGAATTTTT TATTAACGTT CTTCATGGAA TCGTTTAATG TCTTGGGGTT TGAATCGTCT TTCCCTGTTT TGCTGAAGTC AGTTTTCAGC TCGTCATGAA CTGCACTTTA GTTAAATTGG TGTTGGTCGT GAATCCCAAG ATTTTCATCG TCAAACTCCT CTGTTCCGTC TGTAGTCAGA GAATTCTCTT CCGTACAGGT GCATGAAGAG GATGTCGAGT TTTATTGTTC ATACATGTTG CGTGGTCTGA CTTAGATGTT AACTTTTTCT CGTGTATTTT GCAGAAAACG GTTATTCAAC ATGATAAACG AGCTGCCCAC TGTTTTTGAT GTGGTCACTG GGAAGAAGCC CGTGAAGGAG AAAACTAGTG TGAACAACAC TGGTGGTGGA AACAAGGCCA AGTCCACTGG TTCGAAAGTG GTAGGTCGCT CATTGTCTTA AGAGATGAGT CTCACCAGCT TGACGCCATT GGTGACAAGA CTCTAATTGG GTCAAATGTG GTGGTGAATC CGTCGTTCAA TCAGTACATA TTGGAAATTC AGCTTGAAGG GAATATGTTT TCTAGTTTAA ATATAATTGA GGGATGGGTA AGGACTACTT GCCCAGTGCT GAGGTTTTGG CACTGTCGGG ATTCAAAGGG ATCTTCAAAG TTTCCATTGC AATTCCACTG ATGTGGAAAA GCGGACGTAT TTGTGGACAT GCATTAAGAC GTTTACGGTT CTGTGGTATG AAATCGTGGA ATTCGCTCCG AACGACATAT TTCTTACACT ATTGCACATC CTACCCGTTT ATGGGAGATC GACGTCCACG TGAAGCCGGT TTCGTTGCTC ACAGTCGTAT CATAGAATTC ATTACTTTCA GTTTGAATTC GTCCCATCCA GTCATAGATC TTGCAGTATC TGCTGGAGGA AGACAGGAAC CAATTTAATC ACGAATGGCT ACTCAATCAG TAAGCAGCAG CTATTGAGAG GGACCTTTGA CTATTTGGAG GGGATATTAG TTATATATAA TTGAAGTATT TGCAGTTTCC CGTTGTGGTT CTGTGAGCAC GTTAGAAGGA TCTAACTCTG AGCGCTACTT GCTCTCGTGA GGCGCCAGTT GCGATTCACG AGGGCCAGGT CCAAACTAGA CCTTGTCGCT TTTTCACCTC AACAGGAAGC ACACCATTGT GCGTTTGCGC TTTCCCCACC CTTTTCTCGG GTGAACTGGG TAGCGAGTTG ACAAGAAGAT AAGTGCGATT CGCCAGGTGG GCCCATCTCG CGTGACACTA TCAGCGCTTA CGCGGTGCTG TTGAGGAGTC AAAAGAATTT GGCTTCCGTG CTCTCAACCG TGTTTTTCTA ACATGCTACG GTCTTTTTCC ATGCTCGGCA TCTCGGCTCT CTTCTGAGGC CTGCATTTGA ATGAAGAGGA AGCATTTTTG TTTACATTGC CGCTTTGCAA GTAGCTTCTC ATCTTAGGTG TACGTATTCT CACGTCTAGC TACACGTCAG AAGAGGTCAT AGTTCTAGAA CCGAAAGGCT ATGTCTGCCG TCCTGCTCTT TCCTTGCGCC AGTCATTTAT TAGCATCAGT TCATGCATCT AAACATTGCT CAGGTCTCTT TGCTTTATTT TTGGTTATAC CAGAAAGTTT GGCAAGTCAC TTATGCTGAT AGCTACCTGG TCCTTATCCA CCAGCTTACC AAACTAGTTG GTTTCACTAT TCCGTCTGAT TACTCTGCAG GTCGATGTCG ATGAGTCTCT TCCTGACTTT TCGTGTTGGC CGATTGCTTT TCCTCCCCTA TTATTATGTC CCTAGGTTGT GCTTTCCACT ATTTCCTACA TCCCCACCAT TTTCTCATCC ATTGGAGCGA TTTCGGTACT TCGAAAGCAG GGCTGTGTTT AGACGACATG ATAGATTAAA TTAAGGTCCT GGGTCGTTCA TCTATTTCAC TTGTAAATTT TTATCTGTCG ACCTTACCAT GCAGTATAGT CGGTATTTAG ATTGGGTATC TTATCTTACT CACGAATCTT TTCTCCAAAT TTGTATGCTT TAGCACCATC ATCAGGTCCG TTTATTGCAC ATTGTCGTGA ACTAAGATTT TTAATCAGTA GATTGCAAAA TTGCACCATT CTCGAAAATC CACGTCGTTT CGAGTATTGT TCTGTAAGGC TTTAATCTTG ACATCTTGTG TTACGAACGA GTTCAGTTGT CGACAGCTAG CATTTTTAAC TGCAGAGTTC CTTGATGTAT CTGTACGTTG TTAGAGTCAG CTTTGCCGAG ACGCCGTTTC TCCACATACG AATGAGTATT GTATTGTGAT TTTTGTTATC TTTTTTCAGG GCTAGACTAA TGTTCCTAAA TTCTGACCTT TCTATCTGTG GCTTTGTCCT GCACGAGTAG ACGACTTCTC ATCACGATAA CCTGAAGGCA AATATGCATG TACGAACATC TTCTAATGTT TTAAAAAGTT GTGAATGTTG TTGGTACGCT TATAGTGACT ATGTTATCAG CTATTTCTCG ATCGACTTTT TGAATCAAAC AGCTTTGACA GTCCTCCGAA GCTTTTTACA AAGTTGCAGT ACAAGTCGTG GAAGTCATCC CACTGTCTTT TCGTTTTTGA TGATTCTTTT TGAATGTCAC GGTGTGGAAG ATTGTCAGCC ATTTTTTTTG TTTGGTTTTT GTTATAGTAT AAGTGGTATG GGCCTCCTCG CAAGTTGGAT GCCTGTCCCT TGGACCTCAG TGAGGTTGCC ATCTCCCGTT CCGCATACTT TTATAGCTGT CGAGGTGAAT GACGTTATAG ATCTATCAAA GTTGACGCTG CGAGAATGGT GTCGCTTATT TTGTTGTCTT CATGTCGCAG CAGCGAGCCG CTGAAGTTCA GGCCAAACCC CAAAAGCCTC CTCCAGCTCC TCCTAAGGAC GAAGAAGAAA CTTTGGAAGA GGACGATGAG GAGCACGGCG ACACGTTCTG TGGAAGCTGT GGAGGAAACT ATACCGCCGA TGAGTTTTGG ATAGGCTGTG ATAGCTGTGA AAAGTGGTTC CACGGAAAAT GTGTGAAGAT AACTCCAGCG AGAGCAGAGC ACATTAAACA CTACAAGTGT CCGTCGTGCA GCAACAAAAG GGCGCGTACG TAATGTACTG GGCTGCAGTT ATTTTGTAGC TTTAGGGGCA AGTGCCTTCC GCAACAGTAC CCTTGTAATG ACACGCATTG TTCTTGGCCG CTAGCCGTGG GCAGCCCGTG GGGTACAGCA TTTTCTACAC AAGTTTCTCA ATTGATTTTG GAAGGGGGAG GGCTGGTAGC CACTATCATT CGTAGTGTAG GATAGGCAAC CTACATGACA TCTCCACCGG GATCAGTGGC CCTGAGTCTG TAATCTTTGT TAGTAATCTC AATACTCTTT GTCTTACCGC TCATCTCTGT AAGACTTCTG GTGTGCATGG GCTCTGCACA CGTTTTTAAG TTTCAAGAAG TTAACCTAGT TTCGGTCGAT CAGGTGGTCT AAACTTGCAT CTAAAGTTGT TGGGCTTGGT TCTCCTTCTT TGTTTGCCAT GTACTTAAGT TCCCCGAGGC ATGCCCGATA TTAGCGGAAT GATGATTGGC TGAGTCGTGC TGTGCTACAT TTGCTGTGCA GCCTCGCAGC TCTCATGACC AACTATGACG GGCTTTCGTG GCTGCCTGCA TGATCGTTCA GCCGAGTGGA TTTGCATTCT ACGCACAAGA CCTGGCAACT AGGCTTCAGG AATATATGCA GAAGGTGATA CAGATTGTAA ATGGATTGGA TGGACCATTT ATGTGAAGCT CTGTGAATAA TTCTTGTAAA CTTTGG |
mRNA UTR + CDS |
>Mapoly0029s0079.1 CTCGGGTGCC TGATCTGCGA GTTGTGGTGG CAAAGAAGGG TTCTCGCGAG AAGGGTATTC AAGATGCGCA GTCGCCCGCT GGCTAGCTCT AGTGCGGCGT GGAGTCTTGT TAGCGATTTC TCTTCCCCCT CCTCTTGCAA CCTCGTCTCG ATTGAATTTG CGGCGCCTAT CTTGAAGACT GTGTAGGTCG CACTGTCGTT TAGAGCACCG AGCGCGAGTT CGAAAGGCGG CGGGCTAACT TTCTTTGTAG GTGTGTTTTG AGAGCCCCTC GAGTGCAATG GAGGGAGGGT CGATGTCCAC TGACCCTCGC ACTGTGGAAG AAGTCTTCAA GGATTTCAAA GGCCGGCGAG CGGGAATGCT CAAAGCCCTG ACCTCCGACG TCGAGGAATT CTTCCTCCAG TGCGATCCAG AGAAGGAGAA TCTGTGTCTT TATGGCTTTC CTGACGAAGG ATGGGAAGTC AATCTTCCTT CAGAGGAAGT ACCACCTGAG CTCCCAGAGC CCGCTTTGGG GATCAACTTT GCAAGAGACG GCATGCTGCG GAAAGATTGG TTGTCACTTG TCGCCGTCCA CAGCGACGCG TGGCTTCTTG CTGTCTCGTA TTTTTATGGC GCTCGACTTG ACAAAAATGA GAGAAAACGG TTATTCAACA TGATAAACGA GCTGCCCACT GTTTTTGATG TGGTCACTGG GAAGAAGCCC GTGAAGGAGA AAACTAGTGT GAACAACACT GGTGGTGGAA ACAAGGCCAA GTCCACTGGT TCGAAAGTGA CGACTTCTCA TCACGATAAC CTGAAGGCAA ATATGCATCA GCGAGCCGCT GAAGTTCAGG CCAAACCCCA AAAGCCTCCT CCAGCTCCTC CTAAGGACGA AGAAGAAACT TTGGAAGAGG ACGATGAGGA GCACGGCGAC ACGTTCTGTG GAAGCTGTGG AGGAAACTAT ACCGCCGATG AGTTTTGGAT AGGCTGTGAT AGCTGTGAAA AGTGGTTCCA CGGAAAATGT GTGAAGATAA CTCCAGCGAG AGCAGAGCAC ATTAAACACT ACAAGTGTCC GTCGTGCAGC AACAAAAGGG CGCGTACGTA ATGTACTGGG CTGCAGTTAT TTTGTAGCTT TAGGGGCAAG TGCCTTCCGC AACAGTACCC TTGTAATGAC ACGCATTGTT CTTGGCCGCT AGCCGTGGGC AGCCCGTGGG GTACAGCATT TTCTACACAA GTTTCTCAAT TGATTTTGGA AGGGGGAGGG CTGGTAGCCA CTATCATTCG TAGTGTAGGA TAGGCAACCT ACATGACATC TCCACCGGGA TCAGTGGCCC TGAGTCTGTA ATCTTTGTTA GTAATCTCAA TACTCTTTGT CTTACCGCTC ATCTCTGTAA GACTTCTGGT GTGCATGGGC TCTGCACACG TTTTTAAGTT TCAAGAAGTT AACCTAGTTT CGGTCGATCA GGTGGTCTAA ACTTGCATCT AAAGTTGTTG GGCTTGGTTC TCCTTCTTTG TTTGCCATGT ACTTAAGTTC CCCGAGGCAT GCCCGATATT AGCGGAATGA TGATTGGCTG AGTCGTGCTG TGCTACATTT GCTGTGCAGC CTCGCAGCTC TCATGACCAA CTATGACGGG CTTTCGTGGC TGCCTGCATG ATCGTTCAGC CGAGTGGATT TGCATTCTAC GCACAAGACC TGGCAACTAG GCTTCAGGAA TATATGCAGA AGGTGATACA GATTGTAAAT GGATTGGATG GACCATTTAT GTGAAGCTCT GTGAATAATT CTTGTAAACT TTGG |
CDS |
>Mapoly0029s0079.1 ATGGAGGGAG GGTCGATGTC CACTGACCCT CGCACTGTGG AAGAAGTCTT CAAGGATTTC AAAGGCCGGC GAGCGGGAAT GCTCAAAGCC CTGACCTCCG ACGTCGAGGA ATTCTTCCTC CAGTGCGATC CAGAGAAGGA GAATCTGTGT CTTTATGGCT TTCCTGACGA AGGATGGGAA GTCAATCTTC CTTCAGAGGA AGTACCACCT GAGCTCCCAG AGCCCGCTTT GGGGATCAAC TTTGCAAGAG ACGGCATGCT GCGGAAAGAT TGGTTGTCAC TTGTCGCCGT CCACAGCGAC GCGTGGCTTC TTGCTGTCTC GTATTTTTAT GGCGCTCGAC TTGACAAAAA TGAGAGAAAA CGGTTATTCA ACATGATAAA CGAGCTGCCC ACTGTTTTTG ATGTGGTCAC TGGGAAGAAG CCCGTGAAGG AGAAAACTAG TGTGAACAAC ACTGGTGGTG GAAACAAGGC CAAGTCCACT GGTTCGAAAG TGACGACTTC TCATCACGAT AACCTGAAGG CAAATATGCA TCAGCGAGCC GCTGAAGTTC AGGCCAAACC CCAAAAGCCT CCTCCAGCTC CTCCTAAGGA CGAAGAAGAA ACTTTGGAAG AGGACGATGA GGAGCACGGC GACACGTTCT GTGGAAGCTG TGGAGGAAAC TATACCGCCG ATGAGTTTTG GATAGGCTGT GATAGCTGTG AAAAGTGGTT CCACGGAAAA TGTGTGAAGA TAACTCCAGC GAGAGCAGAG CACATTAAAC ACTACAAGTG TCCGTCGTGC AGCAACAAAA GGGCGCGTAC GTAA |
Protein |
>Mapoly0029s0079.1 MEGGSMSTDP RTVEEVFKDF KGRRAGMLKA LTSDVEEFFL QCDPEKENLC LYGFPDEGWE VNLPSEEVPP ELPEPALGIN FARDGMLRKD WLSLVAVHSD AWLLAVSYFY GARLDKNERK RLFNMINELP TVFDVVTGKK PVKEKTSVNN TGGGNKAKST GSKVTTSHHD NLKANMHQRA AEVQAKPQKP PPAPPKDEEE TLEEDDEEHG DTFCGSCGGN YTADEFWIGC DSCEKWFHGK CVKITPARAE HIKHYKCPSC SNKRART |