Mapoly0030s0009



Description

structure-specific recognition protein 1

Annotation

Database ID Description
PFAM PF00505 HMG (high mobility group) box
KOG KOG0526 Nucleosome-binding factor SPN, POB3 subunit
PFAM PF03531 Structure-specific recognition protein (SSRP1)
PANTHER PTHR13711:SF39 SUBFAMILY NOT NAMED
PANTHER PTHR13711 SWI/SNF-RELATED CHROMATIN BINDING PROTEIN
PFAM PF08512 Histone chaperone Rttp106-like
KEGGORTH K09272 structure-specific recognition protein 1

Nomenclature

Gene symbol Product Transcript ID Status
MpHMGBOX3 transcription factor, HMG-box Public

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0030s0009.1 scaffold_30:127135..134742 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mapoly0030s0009.2 scaffold_30:127979..134742 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.