Mp1g03950



Description

Annotation

Database ID Description
KOG KOG1601 GATA-4/5/6 transcription factors; C-term missing; [K]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50114 GATA-type zinc finger domain profile.
ProSitePatterns PS00344 GATA-type zinc finger domain.
PANTHER PTHR45658:SF46 GATA TRANSCRIPTION FACTOR 9
Pfam PF00320 GATA zinc finger
SMART SM00401 GATA_3
PIRSF PIRSF016992 Txn_fac_GATA_plant
SUPERFAMILY SSF57716 Glucocorticoid receptor-like (DNA-binding domain)
CDD cd00202 ZnF_GATA
PANTHER PTHR45658 GATA TRANSCRIPTION FACTOR
Gene3D G3DSA:3.30.50.10 -
GO GO:0045893 positive regulation of transcription, DNA-templated
GO GO:0005634 nucleus
GO GO:0043565 sequence-specific DNA binding
GO GO:0003677 DNA binding
GO GO:0008270 zinc ion binding
GO GO:0006355 regulation of transcription, DNA-templated
MapolyID Mapoly0005s0212 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGATA2 transcription factor, GATA Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g03950.1 chr1:4229638..4234039 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.