| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
| PANTHER | PTHR47539 | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN OTP51, CHLOROPLASTIC |
| Coils | Coil | Coil |
| Gene3D | G3DSA:3.10.28.10 | Homing endonucleases |
| Pfam | PF03161 | LAGLIDADG DNA endonuclease family |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain |
| SUPERFAMILY | SSF55608 | Homing endonucleases |
| Pfam | PF13041 | PPR repeat family |
| Gene3D | G3DSA:1.25.40.10 | - |
| Pfam | PF01535 | PPR repeat |
| GO | GO:0004519 | endonuclease activity |
| GO | GO:0005515 | protein binding |
| MapolyID | Mapoly0036s0055 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPPR_62 | Pentatricopeptide repeat proteins | Published |
Caution: MBEX data are analyzed based on the v7.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g08110.1 cttgcttgca ttatacaagc cctcgctgcc ccgtaacatc aaatatgaca gattcctcga cttgcatctg cccttagcgt ccaccgattc caacacttga catcaaccaa gcgtctgttg gcgaatttta tgtcgattct ttcgaacgag cttcgatgga ggccgaagac aagctctgta ggaggcacat cctaatgggc cacgaatcgt gcagatggtc gcacaaagct ggccatttca gtaaacagag aacgacagtg gactcctggt ggtgttttcg ggctccgagc gagctgattc cagtctctcg agtacacctt ccgtggcggg ctcttgctcg aagtattgga caattgcgaa gaattgaaac aatggctgcg ccgaagtctc aattttaaag gattctttga aacgaaggat gggagaaggt ccatcgctta gtagtgtacg agaaagcaca caaatcggta gggaaaaatg cgaacgcatg tcctaaggtc gcctcgaatt ccaacaatga atgaaggtac ggggccaagt gagaaatttt agcggagaca gtgctcaatc gtggatcgag agacggaggt caaaaaatgt ggttatgttg tcgaagctcc agctccagct ccgtcgctgc gcagagatta tttctgcgag ccctcgcttc gcattctcca gcgagtgcgg aatccggaag cggcgcagag ccgagggagg gcgccggcga tgagcacgcg cagcggagca gcggcgggag gttttccagg gctttaggcg ccgcaaggcc tcggtcgaat ttcgaaaagc agcgggttcc tcccgccgcc ggcattccga gagcccgagc gaatgtgccc ttcagggacg aagaagacga gcccggacga cgcaggtttc gagatccgtc gagggctcgg ggcggcgaca atctgctgca gcgatctgca atttccgagc gtgaggagcc gagagagcag gaccagcagc aggcgcagca gcggcaatct cgcgaggagg acggaagcct tgatggcggc actcggaggc ttggtggcgc ccgagcaacg tcggcgaaaa ttcgtccgga tcaggtccgt ggtcgtgatg atggtgcggc atttgacagg tcgtcaaggg aacgaccgca ttacgggtat cggttgaaac gagatgggcc cgagatcggc gagtttcgca gactcgatgg tccgagtttg tccagtagaa tttttggtga agatggtgcc gaggaggaag tgacgacgcc acgctctgga cacagggatt catggaaatc cagacaagat cgcgaattct ctgactctga cgaggaattg gaaggtaggg attccagtct ccagctcctg gacgatgagg tgcgtcctcg ctctccaggg ttcccgcgtc gccaggaagg agagaaaaag tggcagtatg cagtaagaaa gaagcagcag ctggcaggat ggaatcgggg aaaggtgaat aaatctcctc atgttacttt catggatgat gaaggactgg ggcatgtccc acagggcgat gagtggaggc gtaagaagtt ggagtggttg tgtagggagc ttgtcggtct gaaacctcgt ggtgttgtca ctattctgaa cgagcagcgc ccgtggatca aaggcgaaga cgtcaagtac atcgtcgagc acctgttgaa gatggatcaa tttctgcgtg cccacagagt atgacctgtg ctaacttttc aactcaaaat tcaggagttt tgtttcgttt cgattaagca gtccctgctt agctctgcgt acgttcaaat ttgttgtgaa ttgcctgatt ttgattacat catgaatcaa aacattcagc tgaaaggaga ttctgggaaa ttgggcaaca gcaaatcata ctaaaacaga agattctgtt ttgtaccgaa tggtccgggg aagtttctta atcggctaac cacgtacctg tcgtctggcg caggttttga aatgggaaat gcagcagcct ttttatgagt tcaattttga actcaatact caagtggcga atgctctcgg ggaaaacaaa aagttaagca ggacgagaga catatatgat ctgatgatcc agaatggaca cgtgcctgag ctctccacct atgttttgct tatcaactgc tatctggagg aaggtaccac cgacactatc ctgaaaggtt tgtatctgta caatcaaatg atgcagctgg gtggacatga gcctcctgcc agtcttcgct ttaaattgtt caaggccctc gctcaaaaga atcttacgct tatcgaagag gcagatgagg tttttgacgg catccgcgca gctggtctgg tgccaactga agagatgtac caacacctgg ttttgctgca tggaaatagc ggcaaccaaa gccgagtgga atccctcacg aaagagatga aggacttggg gataaacatc ggtgaatcaa tatatactgc caatgtcatc agagcctgcg tcaaagacgt agatcttgcc aaggccgaag aatctttcag tgagctgaag aaggtgtggg tgaagcctat tccatcggtc tatgctgccc tgatcaagct gtatggcaaa tcaggtctgc ccgacaaagc cttcgagatg tttcaggaga tcaagcatag tgggattagt ataaacatca atgtctacga agcaatgatc gaagtctctg ccgctgctgg aaacagagag caggcagagc aacttgtgga agaagcggag gcaaggggct tagagtccat gcagggttgc tacaatgccc tgattcgtat gtactcagag ctcggacagt tggaaaagct ggaaaaagtt ttccatgaaa tgccgagcaa acgccattat cccaagattg cttcctacaa tgctcttctc gaggcttacg tgacacacgg cctcgtagaa aaggcagagg cgctctatga agtggtgaaa aaggaaaaga ggatcgctgc caatcccaag acctacgaac ttttgatcaa ggcatacggg aagctgggag cctcggcgaa actgaatgca gactacaagg agatggctgc tcataagatg ggcgtcccca agggaccagc agctgacatt ctgaaggatg ctctcagtcc tagagagatc acagctctga aaaactccaa gctcaagctc tacaagaatc aacgtgaagt gctggccggc gtgctcctgg gtggagcgag ggttgaaagt cacgataaga acagaaccta cgagctgcat tttgagctgg atcctgatga tcaagtcggt gcactgctgc tcaagcactt ataccagcta ttcgccgact ggtctgtgga aggtcccaaa gaacggctgt ccgaggatcc taaacgacct tctgagacca ggaaggtcct cgcgttcagg acggtcagtc atggatcgtt cagatttttt gctcaccagt acaggcctga tgggaaacca aaaatcccta gactgataca tcgctggctc agcaatcaga ctctggccta ttggtacatg tacggtggta agaggtgtgc tcagaccgga ggcattattt tcaatgcttc tgcttacagc agtaaggaac tgacgctggt gttggacgca ttgaagacca agacaatcga atgtgagagg agacagtcgg gggacaagca aagtcttctt gttacaggaa agtctgcttt ctggctgtgg aagttgatgc agcccttcat tgttgctggg gcgagagatt tcttagaacc tgaagacaaa ttggtcattc caacttcgaa gacataggtc acagcttgtg cacaggagta gagcgttcta ttccgagcgg accgtggaga agagagtgca cagcttggta tcgttgatgt ttaagtttct gctgaagacg ggaaggaaca ggtttccatg tgttccttct ccaagcttag caagtgccat gggtctgcag ttgtgccatc gagggcttca tggtcaaatt ttgatagctc cgagaagata cgaatgttaa gtagatgaga gtccttctga gcccgtaagt tgtctagaaa gccaatcgtc gcaagacagg gtgctgagac gacgattcca aaacctggct atatagtgtt agcgaagggt gtaaagcctt tacagtatga aagatgattt ttcacgaggc aaggagtttt gttgttacta ccggacatat ttttttctgt cctggaagaa accggaatca gagcatgtcg agagcgaagg taatagctat tgtaatatca tgaaatcacc tcaacgactt gcaaaaatct tgttcgatac atgtcagctt cttttaggca acatcctttt gatcaaattg agggccggtt cttggctgag aatggattgc ctacatatat catctcaagg gtacctcact tgcttcgttg aatattaaga tgatgcagtg acacggtcct ggccgactaa agttgggcat ttgcaacact ctaaactaaa actcacagct ttgattgcaa ctgaccgcgc agagttctgt caaagcgaag gct |
mRNA UTR + CDS |
| >Mp1g08110.1 cttgcttgca ttatacaagc cctcgctgcc ccgtaacatc aaatatgaca gattcctcga cttgcatctg cccttagcgt ccaccgattc caacacttga catcaaccaa gcgtctgttg gcgaatttta tgtcgattct ttcgaacgag cttcgatgga ggccgaagac aagctctgta ggaggcacat cctaatgggc cacgaatcgt gcagatggtc gcacaaagct ggccatttca gtaaacagag aacgacagtg gactcctggt ggtgttttcg ggctccgagc gagctgattc cagtctctcg agtacacctt ccgtggcggg ctcttgctcg aagtattgga caattgcgaa gaattgaaac aatggctgcg ccgaagtctc aattttaaag gattctttga aacgaaggat gggagaaggt ccatcgctta gtagtgtacg agaaagcaca caaatcggta gggaaaaatg cgaacgcatg tcctaaggtc gcctcgaatt ccaacaatga atgaaggtac ggggccaagt gagaaatttt agcggagaca gtgctcaatc gtggatcgag agacggaggt caaaaaatgt ggttatgttg tcgaagctcc agctccagct ccgtcgctgc gcagagatta tttctgcgag ccctcgcttc gcattctcca gcgagtgcgg aatccggaag cggcgcagag ccgagggagg gcgccggcga tgagcacgcg cagcggagca gcggcgggag gttttccagg gctttaggcg ccgcaaggcc tcggtcgaat ttcgaaaagc agcgggttcc tcccgccgcc ggcattccga gagcccgagc gaatgtgccc ttcagggacg aagaagacga gcccggacga cgcaggtttc gagatccgtc gagggctcgg ggcggcgaca atctgctgca gcgatctgca atttccgagc gtgaggagcc gagagagcag gaccagcagc aggcgcagca gcggcaatct cgcgaggagg acggaagcct tgatggcggc actcggaggc ttggtggcgc ccgagcaacg tcggcgaaaa ttcgtccgga tcaggtccgt ggtcgtgatg atggtgcggc atttgacagg tcgtcaaggg aacgaccgca ttacgggtat cggttgaaac gagatgggcc cgagatcggc gagtttcgca gactcgatgg tccgagtttg tccagtagaa tttttggtga agatggtgcc gaggaggaag tgacgacgcc acgctctgga cacagggatt catggaaatc cagacaagat cgcgaattct ctgactctga cgaggaattg gaaggtaggg attccagtct ccagctcctg gacgatgagg tgcgtcctcg ctctccaggg ttcccgcgtc gccaggaagg agagaaaaag tggcagtatg cagtaagaaa gaagcagcag ctggcaggat ggaatcgggg aaaggtgaat aaatctcctc atgttacttt catggatgat gaaggactgg ggcatgtccc acagggcgat gagtggaggc gtaagaagtt ggagtggttg tgtagggagc ttgtcggtct gaaacctcgt ggtgttgtca ctattctgaa cgagcagcgc ccgtggatca aaggcgaaga cgtcaagtac atcgtcgagc acctgttgaa gatggatcaa tttctgcgtg cccacagagt tttgaaatgg gaaatgcagc agccttttta tgagttcaat tttgaactca atactcaagt ggcgaatgct ctcggggaaa acaaaaagtt aagcaggacg agagacatat atgatctgat gatccagaat ggacacgtgc ctgagctctc cacctatgtt ttgcttatca actgctatct ggaggaaggt accaccgaca ctatcctgaa aggtttgtat ctgtacaatc aaatgatgca gctgggtgga catgagcctc ctgccagtct tcgctttaaa ttgttcaagg ccctcgctca aaagaatctt acgcttatcg aagaggcaga tgaggttttt gacggcatcc gcgcagctgg tctggtgcca actgaagaga tgtaccaaca cctggttttg ctgcatggaa atagcggcaa ccaaagccga gtggaatccc tcacgaaaga gatgaaggac ttggggataa acatcggtga atcaatatat actgccaatg tcatcagagc ctgcgtcaaa gacgtagatc ttgccaaggc cgaagaatct ttcagtgagc tgaagaaggt gtgggtgaag cctattccat cggtctatgc tgccctgatc aagctgtatg gcaaatcagg tctgcccgac aaagccttcg agatgtttca ggagatcaag catagtggga ttagtataaa catcaatgtc tacgaagcaa tgatcgaagt ctctgccgct gctggaaaca gagagcaggc agagcaactt gtggaagaag cggaggcaag gggcttagag tccatgcagg gttgctacaa tgccctgatt cgtatgtact cagagctcgg acagttggaa aagctggaaa aagttttcca tgaaatgccg agcaaacgcc attatcccaa gattgcttcc tacaatgctc ttctcgaggc ttacgtgaca cacggcctcg tagaaaaggc agaggcgctc tatgaagtgg tgaaaaagga aaagaggatc gctgccaatc ccaagaccta cgaacttttg atcaaggcat acgggaagct gggagcctcg gcgaaactga atgcagacta caaggagatg gctgctcata agatgggcgt ccccaaggga ccagcagctg acattctgaa ggatgctctc agtcctagag agatcacagc tctgaaaaac tccaagctca agctctacaa gaatcaacgt gaagtgctgg ccggcgtgct cctgggtgga gcgagggttg aaagtcacga taagaacaga acctacgagc tgcattttga gctggatcct gatgatcaag tcggtgcact gctgctcaag cacttatacc agctattcgc cgactggtct gtggaaggtc ccaaagaacg gctgtccgag gatcctaaac gaccttctga gaccaggaag gtcctcgcgt tcaggacggt cagtcatgga tcgttcagat tttttgctca ccagtacagg cctgatggga aaccaaaaat ccctagactg atacatcgct ggctcagcaa tcagactctg gcctattggt acatgtacgg tggtaagagg tgtgctcaga ccggaggcat tattttcaat gcttctgctt acagcagtaa ggaactgacg ctggtgttgg acgcattgaa gaccaagaca atcgaatgtg agaggagaca gtcgggggac aagcaaagtc ttcttgttac aggaaagtct gctttctggc tgtggaagtt gatgcagccc ttcattgttg ctggggcgag agatttctta gaacctgaag acaaattggt cattccaact tcgaagacat aggtcacagc ttgtgcacag gagtagagcg ttctattccg agcggaccgt ggagaagaga gtgcacagct tggtatcgtt gatgtttaag tttctgctga agacgggaag gaacaggttt ccatgtgttc cttctccaag cttagcaagt gccatgggtc tgcagttgtg ccatcgaggg cttcatggtc aaattttgat agctccgaga agatacgaat gttaagtaga tgagagtcct tctgagcccg taagttgtct agaaagccaa tcgtcgcaag acagggtgct gagacgacga ttccaaaacc tggctatata gtgttagcga agggtgtaaa gcctttacag tatgaaagat gatttttcac gaggcaagga gttttgttgt tactaccgga catatttttt tctgtcctgg aagaaaccgg aatcagagca tgtcgagagc gaaggtaata gctattgtaa tatcatgaaa tcacctcaac gacttgcaaa aatcttgttc gatacatgtc agcttctttt aggcaacatc cttttgatca aattgagggc cggttcttgg ctgagaatgg attgcctaca tatatcatct caagggtacc tcacttgctt cgttgaatat taagatgatg cagtgacacg gtcctggccg actaaagttg ggcatttgca acactctaaa ctaaaactca cagctttgat tgcaactgac cgcgcagagt tctgtcaaag cgaaggct |
CDS |
| >Mp1g08110.1 atgtggttat gttgtcgaag ctccagctcc agctccgtcg ctgcgcagag attatttctg cgagccctcg cttcgcattc tccagcgagt gcggaatccg gaagcggcgc agagccgagg gagggcgccg gcgatgagca cgcgcagcgg agcagcggcg ggaggttttc cagggcttta ggcgccgcaa ggcctcggtc gaatttcgaa aagcagcggg ttcctcccgc cgccggcatt ccgagagccc gagcgaatgt gcccttcagg gacgaagaag acgagcccgg acgacgcagg tttcgagatc cgtcgagggc tcggggcggc gacaatctgc tgcagcgatc tgcaatttcc gagcgtgagg agccgagaga gcaggaccag cagcaggcgc agcagcggca atctcgcgag gaggacggaa gccttgatgg cggcactcgg aggcttggtg gcgcccgagc aacgtcggcg aaaattcgtc cggatcaggt ccgtggtcgt gatgatggtg cggcatttga caggtcgtca agggaacgac cgcattacgg gtatcggttg aaacgagatg ggcccgagat cggcgagttt cgcagactcg atggtccgag tttgtccagt agaatttttg gtgaagatgg tgccgaggag gaagtgacga cgccacgctc tggacacagg gattcatgga aatccagaca agatcgcgaa ttctctgact ctgacgagga attggaaggt agggattcca gtctccagct cctggacgat gaggtgcgtc ctcgctctcc agggttcccg cgtcgccagg aaggagagaa aaagtggcag tatgcagtaa gaaagaagca gcagctggca ggatggaatc ggggaaaggt gaataaatct cctcatgtta ctttcatgga tgatgaagga ctggggcatg tcccacaggg cgatgagtgg aggcgtaaga agttggagtg gttgtgtagg gagcttgtcg gtctgaaacc tcgtggtgtt gtcactattc tgaacgagca gcgcccgtgg atcaaaggcg aagacgtcaa gtacatcgtc gagcacctgt tgaagatgga tcaatttctg cgtgcccaca gagttttgaa atgggaaatg cagcagcctt tttatgagtt caattttgaa ctcaatactc aagtggcgaa tgctctcggg gaaaacaaaa agttaagcag gacgagagac atatatgatc tgatgatcca gaatggacac gtgcctgagc tctccaccta tgttttgctt atcaactgct atctggagga aggtaccacc gacactatcc tgaaaggttt gtatctgtac aatcaaatga tgcagctggg tggacatgag cctcctgcca gtcttcgctt taaattgttc aaggccctcg ctcaaaagaa tcttacgctt atcgaagagg cagatgaggt ttttgacggc atccgcgcag ctggtctggt gccaactgaa gagatgtacc aacacctggt tttgctgcat ggaaatagcg gcaaccaaag ccgagtggaa tccctcacga aagagatgaa ggacttgggg ataaacatcg gtgaatcaat atatactgcc aatgtcatca gagcctgcgt caaagacgta gatcttgcca aggccgaaga atctttcagt gagctgaaga aggtgtgggt gaagcctatt ccatcggtct atgctgccct gatcaagctg tatggcaaat caggtctgcc cgacaaagcc ttcgagatgt ttcaggagat caagcatagt gggattagta taaacatcaa tgtctacgaa gcaatgatcg aagtctctgc cgctgctgga aacagagagc aggcagagca acttgtggaa gaagcggagg caaggggctt agagtccatg cagggttgct acaatgccct gattcgtatg tactcagagc tcggacagtt ggaaaagctg gaaaaagttt tccatgaaat gccgagcaaa cgccattatc ccaagattgc ttcctacaat gctcttctcg aggcttacgt gacacacggc ctcgtagaaa aggcagaggc gctctatgaa gtggtgaaaa aggaaaagag gatcgctgcc aatcccaaga cctacgaact tttgatcaag gcatacggga agctgggagc ctcggcgaaa ctgaatgcag actacaagga gatggctgct cataagatgg gcgtccccaa gggaccagca gctgacattc tgaaggatgc tctcagtcct agagagatca cagctctgaa aaactccaag ctcaagctct acaagaatca acgtgaagtg ctggccggcg tgctcctggg tggagcgagg gttgaaagtc acgataagaa cagaacctac gagctgcatt ttgagctgga tcctgatgat caagtcggtg cactgctgct caagcactta taccagctat tcgccgactg gtctgtggaa ggtcccaaag aacggctgtc cgaggatcct aaacgacctt ctgagaccag gaaggtcctc gcgttcagga cggtcagtca tggatcgttc agattttttg ctcaccagta caggcctgat gggaaaccaa aaatccctag actgatacat cgctggctca gcaatcagac tctggcctat tggtacatgt acggtggtaa gaggtgtgct cagaccggag gcattatttt caatgcttct gcttacagca gtaaggaact gacgctggtg ttggacgcat tgaagaccaa gacaatcgaa tgtgagagga gacagtcggg ggacaagcaa agtcttcttg ttacaggaaa gtctgctttc tggctgtgga agttgatgca gcccttcatt gttgctgggg cgagagattt cttagaacct gaagacaaat tggtcattcc aacttcgaag acatag |
Protein |
| >Mp1g08110.1 MWLCCRSSSS SSVAAQRLFL RALASHSPAS AESGSGAEPR EGAGDEHAQR SSGGRFSRAL GAARPRSNFE KQRVPPAAGI PRARANVPFR DEEDEPGRRR FRDPSRARGG DNLLQRSAIS EREEPREQDQ QQAQQRQSRE EDGSLDGGTR RLGGARATSA KIRPDQVRGR DDGAAFDRSS RERPHYGYRL KRDGPEIGEF RRLDGPSLSS RIFGEDGAEE EVTTPRSGHR DSWKSRQDRE FSDSDEELEG RDSSLQLLDD EVRPRSPGFP RRQEGEKKWQ YAVRKKQQLA GWNRGKVNKS PHVTFMDDEG LGHVPQGDEW RRKKLEWLCR ELVGLKPRGV VTILNEQRPW IKGEDVKYIV EHLLKMDQFL RAHRVLKWEM QQPFYEFNFE LNTQVANALG ENKKLSRTRD IYDLMIQNGH VPELSTYVLL INCYLEEGTT DTILKGLYLY NQMMQLGGHE PPASLRFKLF KALAQKNLTL IEEADEVFDG IRAAGLVPTE EMYQHLVLLH GNSGNQSRVE SLTKEMKDLG INIGESIYTA NVIRACVKDV DLAKAEESFS ELKKVWVKPI PSVYAALIKL YGKSGLPDKA FEMFQEIKHS GISININVYE AMIEVSAAAG NREQAEQLVE EAEARGLESM QGCYNALIRM YSELGQLEKL EKVFHEMPSK RHYPKIASYN ALLEAYVTHG LVEKAEALYE VVKKEKRIAA NPKTYELLIK AYGKLGASAK LNADYKEMAA HKMGVPKGPA ADILKDALSP REITALKNSK LKLYKNQREV LAGVLLGGAR VESHDKNRTY ELHFELDPDD QVGALLLKHL YQLFADWSVE GPKERLSEDP KRPSETRKVL AFRTVSHGSF RFFAHQYRPD GKPKIPRLIH RWLSNQTLAY WYMYGGKRCA QTGGIIFNAS AYSSKELTLV LDALKTKTIE CERRQSGDKQ SLLVTGKSAF WLWKLMQPFI VAGARDFLEP EDKLVIPTSK T |